Xanthomonas axonopodis pv. citrumelo F1: XACM_3097
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Entry
XACM_3097 CDS
T01616
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
xax
Xanthomonas axonopodis pv. citrumelo F1
Pathway
xax00300
Lysine biosynthesis
xax00470
D-Amino acid metabolism
xax01100
Metabolic pathways
xax01110
Biosynthesis of secondary metabolites
xax01120
Microbial metabolism in diverse environments
xax01230
Biosynthesis of amino acids
Module
xax_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xax00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XACM_3097
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XACM_3097
Enzymes [BR:
xax01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
XACM_3097
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF6401
Motif
Other DBs
NCBI-ProteinID:
AEO43348
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All DBs
Position
3582993..3584282
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AA seq
429 aa
AA seq
DB search
MSLHIDTAALLAALPQVRDRCEGPICAYVYDLAALDTHAAWMRAQLPAQCELFYAAKANA
EPPILQTLAAHVDGFEAASGGELAWLHAQQPQAPLLFGGPGKLDTELAQAAALPDCTVHV
ESLSELERLAAIAAHAGRCVPVFLRMNIAVPGAQSTRLMMGGQPSPFGLDPSDLDAAIRR
VQANPSLRLEGFHFHLMSHQRSAAAQLHLVAAYLHTVQQWRQTYALGPLRVNAGGGFGVD
YLAPDASFDWARFCAELPAVLREHGTDLRLRLEPGRYLSASCGWYLMEVLDLKRSHGAWF
AVARGGTHHFRTPAAQAHDHPFRVLRGERAPVLRDTTVTLVGQLCTPKDVLARQQPVAAL
APGDCLAFPLAGAYAWNISHQHFLMHPAPQMVFLPATHYLGNATSPDRCTGNRMSARNSA
SATVSGSSR
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
gtgagtctgcacatcgacaccgccgcactgcttgcggccttgccgcaggtgcgcgaccgc
tgcgaaggcccgatctgcgcgtatgtctacgatctggcggcattggacacgcatgcggcc
tggatgcgtgcgcagctgccggcgcagtgcgagctgttctatgcagccaaagccaatgca
gaaccgccgattctgcaaacgctggcagcgcacgtggatggcttcgaagccgcatccggc
ggcgaactcgcctggctgcatgcgcagcaaccgcaggcaccgttgttgttcggtggcccg
ggcaaactcgataccgaactcgcccaggcagccgccctgcccgactgcaccgtgcatgtg
gaaagcctgagcgaactcgaacgcctggcagcaattgcagcgcacgccggccgctgcgtg
cccgtattcctgcgcatgaatatcgccgtacccggcgcgcagagcacgcgcctgatgatg
ggcgggcaaccctcgccgttcggcctggatccaagcgatttggatgcagcaatccggcga
gtgcaggccaatccatcgctgcgcctggaaggcttccatttccatctgatgtcgcatcaa
cgcagcgccgccgcgcagctgcatctggtggccgcctacctgcacaccgtgcagcaatgg
cgacagacctatgcgcttggtccactgcgggtaaacgccggtggcggcttcggtgtggac
tacctggcaccggacgcgtcgttcgactgggcccgcttctgtgccgagctgcctgccgtg
ctgcgcgaacacggtacagacctgcgcttgcgtctggagccgggccgttacctcagcgcc
agctgcggttggtacctgatggaagtgctcgatctcaaacgcagccacggcgcctggttt
gcggttgcgcgcggtggtacccatcactttcgtacgccggccgcgcaggcgcacgatcat
ccattccgcgtattgcgcggcgagcgtgcgccagtgttgcgcgataccacggtgaccctg
gtcggccagttatgcacgcccaaggacgtgctggcacgccagcaaccggtggccgcactc
gcacccggcgattgcctggccttcccgctggcgggcgcctatgcgtggaatatttcgcac
cagcactttctgatgcacccggcaccgcagatggtgttcttgccggcgacgcattacctc
ggtaacgcgacctcgcccgaccgctgcacgggcaaccgaatgtccgcacgcaactcggcc
tcggcgacggtttccggatcatcgagatag
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