Xenorhabdus bovienii SS-2004: XBJ1_4108
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Entry
XBJ1_4108 CDS
T01186
Symbol
lsrR
Name
(GenBank) putative transcriptional repressor with DNA-binding Winged helix domain
KO
K11531
lsr operon transcriptional repressor
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XBJ1_4108 (lsrR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xbo03000
]
XBJ1_4108 (lsrR)
Transcription factors [BR:
xbo03000
]
Prokaryotic type
Other transcription factors
Others
XBJ1_4108 (lsrR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sugar-bind
HTH_Crp_2
Crp
Sigma70_r4
MarR_2
HTH_31
HTH_37
Motif
Other DBs
NCBI-ProteinID:
CBJ83220
UniProt:
D3V6E1
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All DBs
Position
3952510..3953424
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AA seq
304 aa
AA seq
DB search
MSEEELLARIAWFYYHDGLTQGDIGELLGLSRLKISRLLEKGRQTGVIRVQINSRYEGCL
ELEDTLQKRFNLKQVRVLPALDEININTRLGVGAAHLLMALIEPSQLLAIGFGETPMCTL
QHLSGFISSQQIRLVTLSGGVGPYMTGIGQLDADCPVSIIPAPLRASTHQVAATFREERS
VRDVILTACAADIAVVGIGAINQRQQATIMRSGYISDGEQLMFGRKGAIGDILGYFFNAE
GELVSHIDIHQELIGISLPELKTIPNVIGVAGGIEKAGAIIAALKGGYISSLVTEEQTAR
AMLT
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagaagaactactggctcgcatagcctggttttactatcacgatggtctgact
caaggagacatcggtgaattgctcggcctcagccgcctcaaaatctcccgcctactggag
aaagggcggcagacgggcgtgatccgcgtgcagatcaattcacgctatgaagggtgtctg
gaattggaagatacgctgcaaaaacgctttaatctcaagcaggttcgtgtactgccggct
cttgacgaaataaatatcaacacccgtcttggcgtcggcgctgcccacctgctaatggca
ctgattgagcctagtcagctactggctatcggatttggcgaaaccccgatgtgtacttta
cagcacctgagtgggtttatttcgtcccaacaaatccggctggtgacgttgtctggcggc
gtcggaccttatatgacggggattggtcagcttgatgcagactgccctgtcagcatcatt
cctgcaccgctgcgggcgtcaactcaccaagtcgccgctacgttccgcgaagaacgcagt
gtgcgggatgtgatcctgactgcctgtgccgcagatatcgccgtggtgggaatcggagcg
atcaaccagcgacagcaggcgaccatcatgcgttccggctatatcagcgacggagaacaa
ttgatgtttggccgcaaaggcgcgattggggatatcctcggttatttcttcaatgcagaa
ggtgagctggtcagccatatcgatatccatcaggaactgatcggtatctccctgccagaa
ctgaaaacgatcccgaatgtgatcggtgtggcgggtggtattgaaaaagccggtgccatc
attgccgcactgaaaggcggctatattagctcgctggtaaccgaagaacagaccgcaaga
gccatgctgacgtaa
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