Xenorhabdus bovienii SS-2004: XBJ1_4132
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Entry
XBJ1_4132 CDS
T01186
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
xbo
Xenorhabdus bovienii SS-2004
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xbo03019
]
XBJ1_4132 (orn)
03009 Ribosome biogenesis [BR:
xbo03009
]
XBJ1_4132 (orn)
Messenger RNA biogenesis [BR:
xbo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
XBJ1_4132 (orn)
Ribosome biogenesis [BR:
xbo03009
]
Eukaryotic type
Pre-60S particles
RNases
XBJ1_4132 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CBJ83244
UniProt:
D3V6G5
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All DBs
Position
3974276..3974821
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AA seq
181 aa
AA seq
DB search
MSKSENNLIWIDLEMTGLEPERDRIIEIATIVTDSELNILAEGPVIAVYQPDEQLALMDD
WNVRTHTASGLVERVKQSQFGDAEAEKATIAFLEQWVPAGKSPICGNSVGQDRRFLFRYM
PELEKYFHYRYLDVSTLKELARRWKPEMLSGFSKKNTHQALDDIRESIAELVYYREHFIQ
K
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagtgagaacaatcttatctggatagatttagagatgaccggtttggagcca
gagcgcgatcgcataattgaaatcgcgaccattgtcaccgactcggaactgaatatcctt
gcggaagggccggttattgcggtgtatcagcctgatgaacaactggcattgatggatgac
tggaacgtgcggacgcatactgcaagtgggctggttgagcgagtgaaacaaagtcagttt
ggtgatgcggaagcagaaaaagcgacgattgcttttctggagcagtgggttcctgcggga
aaatctcctatttgcgggaatagtgtgggtcaagatcgccgttttttgttccgttatatg
ccagagttggagaaatattttcattaccgctatctggatgtcagtacgctcaaagaattg
gctcgccgctggaagcctgaaatgttgtcgggattcagcaagaaaaatactcatcaggca
ttggacgacattcgggaatcaattgctgagttggtttactaccgcgagcactttatccag
aaataa
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