Xenorhabdus bovienii SS-2004: XBJ1_4212
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Entry
XBJ1_4212 CDS
T01186
Symbol
rsmB
Name
(GenBank) 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xbo03009
]
XBJ1_4212 (rsmB)
Enzymes [BR:
xbo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
XBJ1_4212 (rsmB)
Ribosome biogenesis [BR:
xbo03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
XBJ1_4212 (rsmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_31
FtsJ
Methyltransf_25
Cons_hypoth95
Methyltransf_5
Methyltransf_15
MTS
Methyltransf_12
Met_10
Methyltransf_33
BpsA_C
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
CBJ83320
UniProt:
D3V6P1
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All DBs
Position
4049918..4051204
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AA seq
428 aa
AA seq
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MKNTYNLRNIAAKAIHQVLEQGQSLSTVIPELQQRVSDKDKALLQELCFGVIRVLPQLEW
FIGQLMAKPLKGKQRIFHYLIMVGIYQLTYTRIPAHAALAETVNGAISLKRPQLKGLING
VLRQFQRQQQTLVEQVNNVSCHLHPKWLLDHIQKAYPQDWQKIIDANNQKPPMWLRVNQR
YHSANQYLALLQEANIDAELDENHPSAIRLLNPCPVNTLPGFDQGWVTIQDRSAQGCAEL
LTPCDGESILDLCAAPGGKTTHILEIAPKSKVLAVDIDEQRIKRVKENLQRLNLHAVVKT
GDGRFPHEWATGEQFDRILLDAPCSATGVIRRHPDIKWLRRNEDIDQLVTLQTEILDAIW
PYLKKHGTLVYATCSILPHENSQQIKAFLGRHTDAALSDTGTLDKPGIQIIPETTGGDGF
FYARLTKY
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatacatataacctgcgaaacatcgccgcaaaagcgatccatcaagtactggaa
caagggcagtcactcagcactgttattcctgaactccaacaaagagtttctgacaaagat
aaagctcttctccaagaactctgttttggcgtaataagggtattacctcaactagaatgg
ttcattggtcagttgatggcaaagccattgaaaggcaaacaacgcatttttcactatcta
atcatggttggaatctatcagctcacttatactcgtatacctgcacatgcagcgcttgcc
gaaaccgtcaatggcgcgatcagtttaaaacgtccgcaattaaaaggcttaattaatggc
gttctccgccaatttcagcgccaacaacagacattagtcgagcaagttaataatgtcagc
tgccatttacatcccaaatggctgttagatcatattcaaaaagcctatccacaggactgg
caaaagattattgacgcaaataatcaaaaacctcccatgtggttacgagttaatcagcgc
tatcatagtgctaatcaatatctagctctgttgcaagaagctaatatagacgcagagcta
gatgaaaatcatcccagcgctattcgcttgctaaatccttgccctgttaacactctaccc
ggattcgatcaaggatgggtgactattcaagatcgctctgctcaagggtgtgctgaatta
ttaacgccatgtgacggagaatctatactggatctgtgtgctgcccctggaggaaaaacc
acccatatccttgagatagcgccaaagtcaaaagtacttgccgtcgatattgatgaacag
agaattaaacgagtgaaagaaaatttacagcgccttaatttgcatgctgtcgtcaaaaca
ggtgatggacgttttccacatgaatgggcaacaggggaacagttcgatcgcattcttctt
gatgcaccatgctcagcaacaggtgttattcgtcgtcaccctgacataaaatggctgcgt
cgaaatgaagatattgaccaattggttacgctacaaactgaaatccttgatgccatttgg
ccatatttaaagaaacatggcactctggtttatgcaacctgctccattttacctcatgaa
aatagccaacaaataaaagcattcttaggacgccacacagatgctgcattatcagataca
ggcacgcttgacaaaccagggatacaaattattcctgaaacaacaggtggtgacggcttc
ttttatgcccgactaactaagtattga
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