Xenorhabdus bovienii CS03: XBW1_3574
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Entry
XBW1_3574 CDS
T03845
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
xbv
Xenorhabdus bovienii CS03
Pathway
xbv03030
DNA replication
xbv03430
Mismatch repair
xbv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XBW1_3574 (holA)
03430 Mismatch repair
XBW1_3574 (holA)
03440 Homologous recombination
XBW1_3574 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xbv03032
]
XBW1_3574 (holA)
03400 DNA repair and recombination proteins [BR:
xbv03400
]
XBW1_3574 (holA)
Enzymes [BR:
xbv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XBW1_3574 (holA)
DNA replication proteins [BR:
xbv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XBW1_3574 (holA)
DNA repair and recombination proteins [BR:
xbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XBW1_3574 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
CDM90932
UniProt:
A0A0B6XAM8
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All DBs
Position
3410190..3411230
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AA seq
346 aa
AA seq
DB search
MIRLYPEQLLSQLNEGLRNNYLLWGNEPLLLQESQDSIRRVAEQHGFLEHFTFSLDNHTE
WEEIFSLCQSLSLFSSRQSLTLLLPENGPNAAMVERLTKLSGLLHADILLILRGHKLTKA
QENSPWFKTLGQNGVYVSCLTPEQNRLPQWVAQRARSMGLSLEDEANQLLCYCYEGNLLA
LAQALERLSLLHPDNRLTLPRVEEAVNDAAHFAPYHWVDALLAGKIKRAWHILKQLRQED
TEAIILLRTIQRELMLLLILKRQDKTTPLKTLFDQHKVWQNRRSLLTTALQRLSQQDLQS
AIHLLTQMELCVKQDYGQSIWADLETLSMLLCGKTLPESFLNASFH
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgatccgactctatcctgaacaactcctttcgcagctcaatgaagggctgcgaaacaat
tacctgctatggggcaacgagccgttgctgttgcaggaaagtcaggacagcatccgcaga
gtggctgaacagcatggttttctggagcatttcaccttttctttggataaccatactgaa
tgggaagaaatattcagcctgtgccagtcactcagcctgttttcctctcgccagtcactt
accctgctactgccggaaaatggcccaaatgcagcaatggtagaacggctaaccaagctg
tctggattgctgcacgcagatatcttattgatattacgtgggcataaactcaccaaggcg
caggaaaacagtccgtggttcaaaacacttggccaaaatggtgtgtacgtcagttgtctg
acacctgaacaaaaccgtcttcctcaatgggtggcacaacgtgccagaagcatggggcta
tcactggaagatgaagctaaccaactactatgctattgctatgagggaaatttattggca
ctggctcaggcactggaacgcctttctctgctccatcccgataatcggctgacgcttccc
cgtgtcgaagaagctgtcaacgatgcggcacattttgccccctatcactgggttgatgcc
ctgctggcaggcaaaatcaaacgggcgtggcatatactgaaacaacttcgacaagaagat
actgaagcgatcatcctgcttcgcaccatacaacgagagctaatgctgctgttaatcctc
aaacgtcaggataagacgacccctttgaagacactgtttgatcaacacaaagtctggcaa
aaccgtcgatcactgctgacaaccgcattacagcgcttgtcacagcaagatctgcaatca
gccatacatttgctgacccagatggaactgtgcgtcaaacaggattatggccaatcgatt
tgggctgacctggaaacactatccatgctgttatgcggaaaaacattaccagagagcttc
ttgaatgcttcattccactga
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