Xanthomonas campestris pv. campestris ATCC 33913: XCC2168
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Entry
XCC2168 CDS
T00083
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xcc03019
]
XCC2168 (orn)
03009 Ribosome biogenesis [BR:
xcc03009
]
XCC2168 (orn)
Messenger RNA biogenesis [BR:
xcc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
XCC2168 (orn)
Ribosome biogenesis [BR:
xcc03009
]
Eukaryotic type
Pre-60S particles
RNases
XCC2168 (orn)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF2252
Motif
Other DBs
NCBI-ProteinID:
AAM41448
UniProt:
Q8P8S1
Structure
PDB
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All DBs
Position
complement(2556895..2557479)
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AA seq
194 aa
AA seq
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MADNVAGNDRLIWIDLEMTGLDTDRDSIIEIATIVTDAQLNVLAEGPELAIAHSLETLEA
MDEWNRNQHRRSGLWQRVLDSQVTHAQAEAQTVAFLSEWIRAGASPMCGNSICQDRRFLH
RQMSRLERYFHYRNLDVSTIKELARRWAPAVASGFAKSSAHTALSDVRDSIDELRHYRQF
MGTLGGDNGGGVQN
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaacgttgcgggcaacgaccgactgatctggatcgatctggaaatgaccggc
ctggataccgatcgcgattcgatcatcgagatcgccaccatcgtgaccgatgcgcagttg
aacgtgctcgccgaggggccggaactggccattgcccattcgctggaaaccctggaagcg
atggacgagtggaaccgcaaccagcaccgccgctccggcctgtggcaacgcgtgctcgac
agccaggtcacccacgcgcaagccgaggcgcagacagtggccttcctgagcgaatggatc
cgcgccggcgcctcgccgatgtgcggcaattcgatctgtcaggaccgccgtttcctgcac
cgccagatgtcacgcctggagcgctacttccactaccgcaacctggacgtgtccaccatc
aaggaactggcgcggcgatgggcaccggcagtggcctccggctttgccaagagttcggcg
catacggcgctgagcgacgtacgcgactccatcgacgagctgcggcactaccggcagttc
atgggcacgctaggtggcgataacggcggcggtgtgcagaactga
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