Xylanimonas cellulosilytica: Xcel_1083
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Entry
Xcel_1083 CDS
T01135
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
xce
Xylanimonas cellulosilytica
Brite
KEGG Orthology (KO) [BR:
xce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xce03019
]
Xcel_1083
03009 Ribosome biogenesis [BR:
xce03009
]
Xcel_1083
Messenger RNA biogenesis [BR:
xce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Xcel_1083
Ribosome biogenesis [BR:
xce03009
]
Eukaryotic type
Pre-60S particles
RNases
Xcel_1083
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ACZ30114
UniProt:
D1BZG0
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All DBs
Position
complement(1164084..1164722)
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AA seq
212 aa
AA seq
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MSVPSPNDRIVWIDCEMTGLDARADALIEVAAVVTDSELNVLDDGIDVLIAPPAAALEGM
GDFVRTMHTTSGLLDELAAGATLAEAEQQVLAYIKRWVPDAGKAPLAGNSVGTDKMFLDR
DMPELVGHLHYRIIDVSSVKELSRRWYPRAYFSSPKKDGGHRALADILESIDELRYYREA
VFVPQPGPDTATARAVAARIAETSVTRRSVQP
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgttccctcccccaacgaccgcatcgtgtggatcgactgcgagatgaccggcctc
gatgcacgcgccgacgcgctgatcgaggtcgccgccgtcgtcacggactccgagctgaac
gtgctggacgacggcatcgacgtgctgatcgcgccccccgcggccgccctggaaggcatg
ggcgacttcgtgcgcaccatgcacacgacgtcgggcctgctcgacgagctcgccgcgggc
gccaccctcgccgaggcggagcagcaggtcctcgcgtacatcaagcgatgggtgcccgac
gccgggaaggcgcccttggccggcaactcggtgggcaccgacaagatgttcctcgaccgt
gacatgcccgagctggtcggccacctgcactaccgcatcatcgacgtcagctccgtcaag
gagctctcgcgccgctggtacccgcgcgcctacttcagctcccccaagaaggacggcggc
caccgcgcgctcgccgacatcctcgagtcgatcgacgagctgcggtactaccgcgaggcc
gtgttcgtgccccagcccggcccggacaccgccacggcgcgggccgtcgcggcgcgcatc
gccgagacgtcggtcacgcgcaggtcggtccagccgtaa
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