Xanthomonas citri pv. citri mf20: J172_01712
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Entry
J172_01712 CDS
T03781
Name
(GenBank) diguanylate cyclase (GGDEF) domain
Organism
xcf
Xanthomonas citri pv. citri mf20
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
Reg_prop
Y_Y_Y
DUF5074
MSC
Motif
Other DBs
NCBI-ProteinID:
AJZ08285
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All DBs
Position
1814110..1816983
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AA seq
957 aa
AA seq
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MRDYAIDSWSSRNGLPHNSLRDIAQTRDGYLWFATWEGLVRYNGLEFSVIDRSTRPGLPD
NGVGALYVDRDGALWLSDARGNLVRHAADGQWRQWQWQRQGQWPQALIHAMTMDAEGRMW
LLFEGHGLGCLWPDGHFDYSPPHDDAPLQSSFPRMVFDARGRLLIGTFDGLIYREPDGRM
HRAPAAFGFPPGLAWPYRATDGTVWVVAGDQLYRLQGERAELVHRVPGHGHFTAMLQDRR
GDLWLGSENQGLLRIGPYGVEQLPAGRSLPTGRIVSLREDAEGSIWVGANGGLFRLRETL
FSSYSQRDGLSGDYSRAMLEDRDGSLWIAGTAGLDRMLPDGRIVPVPVVTPSGRRLSVLS
LALDRHGDLWVGTYADGVFVLRAGRVLSHYGEAEGIPGGHIRAIVIDDHDAVWLATQRGV
AQLVDGRRAPLAIEGLPASVVTALASVDGALWIGSVDGAAVLRNGKLRQLNLEKLGGARS
VFGFQPIGDAMWIATDRGLYRERNGVLARVGLEQGMPVDTVFQLIDDRRGNAWISSNRGV
LRTELKTLNAVADGHGTLAIERYGEIDGMGNAQANGSSGPSLLRRADGTVWVVTAGGVSR
VAPSRLQRFRERRPPPAVIENVQQDGQPLVWRQRAQLAGGHRLNVSYVGMSFLLPERIEY
RTRLEGLDASWTERGRQRSVEFIGLPPGRYRLHVAARHPGGAWSPHEAVWAFEVLPLWWQ
RQDVRLAAALGTLLLLALLYRVLLHRYKTHNARLAELVRKRTEDLQRQAQRLLQANQEKS
ELLTRLRIKSDVFERQAHEDALTGLPNRRHFDEALARDISRARRSARPLVLAILDIDHFK
RINDHYSHASGDAVLHEVGVLLTAAARASDLPARLGGEEFALLLADTTLDEAQALCLRIR
ALFHARHNWGSVEGLQVTFSAGVAALRDEDTGSSLMQRADHALYEAKSAGRDRICVG
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgattacgccatcgatagctggagttcgcgcaacgggctgccgcacaactccttg
cgcgacatcgcccagacccgcgacgggtatctgtggtttgcaacctgggaaggcctggtg
cgctacaacgggctggaattcagcgtgatcgaccgcagcacgcgccctgggctgcccgat
aacggcgtcggcgcactctacgtagatcgcgatggcgcgctgtggctgagcgatgcacgc
ggcaacctggtccggcatgctgccgatgggcaatggcggcagtggcagtggcagcggcag
gggcagtggccgcaggcgttgatccatgccatgaccatggacgctgaaggccgcatgtgg
ctgttgttcgaagggcatgggctgggctgcctgtggccggatgggcacttcgactattcc
ccgccgcacgatgacgcgccactgcagagcagctttccgcgcatggtgttcgatgcgcgg
gggcgcttgttgatcggcaccttcgatggattgatctaccgcgaaccggatgggcgcatg
caccgcgcgccggctgcattcgggtttccaccggggttggcatggccgtatcgcgcaacg
gacggcacggtgtgggtggttgcgggcgatcagctgtatcgcctgcagggcgagcgcgcc
gagctggtgcatcgggtgccggggcacggccacttcaccgcgatgctgcaggatcgccgc
ggcgatctgtggctgggcagcgaaaaccaggggctgctgcggatcgggccgtacggcgtg
gagcagctgccggccggtcgcagcctgccgaccggacgtatcgtcagcctgcgtgaggac
gcagaaggcagtatctgggtcggcgccaacggcggtctgttccggctgcgcgagaccctg
ttcagcagctacagccagcgcgatggattaagcggcgactacagccgcgccatgttggaa
gaccgcgacggcagtctgtggatcgccggaaccgccggcctggaccggatgctgccggac
gggcgcatcgtgccggtgccggtggtcacaccctccgggcgacgcctttcggtgctcagt
ctggcgctggaccggcacggcgatctttgggtgggcacctatgccgatggcgtcttcgtg
ttgcgcgctgggcgcgtgctgagccattacggcgaggccgagggcattcccggcgggcat
atccgcgcgatcgtgatcgacgaccacgatgcggtgtggctggcaacccagcgtggcgtg
gcgcagctagtggatggcaggcgcgcgccgttggccatcgaaggcctgcctgccagcgtg
gtgaccgcattggccagcgtcgatggtgcgttgtggatcggttcggtcgatggtgcggca
gtgctacgcaacggcaagctgcgccagttgaatctggaaaaactgggcggcgcgcgcagc
gtgttcggttttcagcccatcggcgatgccatgtggatcgcgaccgatcgcggcctgtat
cgcgagcgcaatggcgtgcttgcacgcgtgggtctggagcagggtatgccggtggatacg
gtgttccagctcatcgacgaccggcgtggcaatgcatggatcagcagcaatcgcggtgtg
ctgcgtaccgaacttaagaccctcaatgccgttgccgacgggcacggcacgctcgcgatc
gaacgctatggcgagatcgatggcatgggcaatgcgcaggccaacggcagttccggcccc
agcctgctgcggcgtgccgacggcacggtgtgggtagtgacagctggcggcgtgagcagg
gtcgccccctcacgcctgcagcgctttcgcgaacgtcgcccgccgccggcagtgatcgag
aatgtgcagcaggatggccagccgttggtgtggcgccagcgcgcacaactggctggcggg
catcgcttgaacgtgtcctacgtcggcatgagctttctgctgccggagcgaatcgagtac
cgcacccgactggagggtctggacgctagctggaccgagcgcggccggcagcgcagcgtg
gaattcatcggcctgccgccgggcaggtatcgtctgcacgtggctgcgcgccatccgggc
ggggcatggagcccgcacgaagcggtgtgggcgttcgaggtattgccgctgtggtggcaa
cgccaggatgtgcgcttggccgcggcgctggggacgctcttgttgctggccttgctgtat
cgcgtgttgctgcatcgctacaagacccataacgcgcgcctggccgagctggtgcgcaag
cgcaccgaggacctgcaacggcaggcgcagcgcttgctgcaggccaaccaggaaaagagc
gagctattgacgcgtttgcgtatcaagtccgacgtgttcgagcgtcaggcgcacgaagat
gcgttgaccgggctacccaaccgtcgccatttcgacgaagcgctggcgcgcgatatcagc
cgtgcacggcgcagtgcgcgcccgctggtgctggcgattctggatatcgatcacttcaag
cgcatcaacgaccattattcgcacgccagcggcgatgcggtcctgcacgaggtgggggtg
cttctcacggcggccgcgcgcgcctcggatctgccggcacgcctgggcggcgaagaattc
gcgctgctattggccgacaccacgctggacgaggcacaggcactttgcctgcgcatccgc
gcgctcttccatgcccgtcacaactggggcagcgtcgagggcttgcaggtgaccttcagc
gccggtgttgccgcactgcgcgacgaagacaccggctcgtcgctgatgcagcgcgccgat
cacgccttgtacgaggccaagagcgccgggcgcgaccggatctgtgtgggttag
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