Xanthomonas citri subsp. citri UI6: J158_01459
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Entry
J158_01459 CDS
T03894
Name
(GenBank) RNA polymerase, sigma-24 subunit, RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
xcj
Xanthomonas citri subsp. citri UI6
Brite
KEGG Orthology (KO) [BR:
xcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xcj03021
]
J158_01459
Transcription machinery [BR:
xcj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J158_01459
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
Phage_antitermQ
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AJY85864
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Position
1524007..1524678
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AA seq
223 aa
AA seq
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MAVSLPDFGGLTGVRPDMAEVDTPQELDLELVRRVQRGESAAFDVLVRKYQHRIVALIGR
YIADWSECQDVAQDTFVRAYRAINSFRGDAQFYTWLHRIAVNTAKNHLVAHNRRPPTDDI
EISDAEQFDGATRLRDTDTPERELMRQELEQTVMRAVQALPEELRLAITLREVEGLSYDE
IAQKMDCPIGTVRSRIFRAREAIDIELRPLLETESATRERHRV
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctcattgcccgacttcggtgggctgacaggagtgcggcccgacatggccgaa
gtcgatacacctcaggagctggacctggaactggtccggcgtgtgcagcgcggcgaaagt
gcggcgttcgatgtgctggtgcgcaagtaccagcatcggatcgttgccttgatcgggcgc
tacatcgccgactggagcgaatgccaggacgttgcccaggacacgttcgtgcgcgcctac
cgcgcgatcaacagttttcggggcgacgcccagttctatacctggctgcaccgcattgcc
gtcaacactgccaagaaccatctggttgcgcacaaccgccgcccgcccaccgacgacatc
gagatcagcgatgccgaacaattcgatggagcgacacggttgcgcgacaccgataccccg
gagcgcgaattgatgcgacaggagctggaacaaacggtgatgcgcgcggtccaagcgcta
ccggaagaacttcggttggccatcaccctgcgcgaggtggagggcctgagctacgacgaa
atcgcgcaaaagatggattgcccgatcggaacggtgcgctcgcgcatcttccgggcgcgc
gaggccatcgacatcgagctgcggcctctgctggagaccgaaagcgctacccgtgagcga
caccgcgtatga
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