Xanthomonas citri subsp. citri UI6: J158_02552
Help
Entry
J158_02552 CDS
T03894
Name
(GenBank) Superfamily II DNA and RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
3.6.4.13
]
Organism
xcj
Xanthomonas citri subsp. citri UI6
Brite
KEGG Orthology (KO) [BR:
xcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xcj03009
]
J158_02552
Ribosome biogenesis [BR:
xcj03009
]
Prokaryotic type
rRNA helicases
J158_02552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AJY86933
LinkDB
All DBs
Position
2774000..2775376
Genome browser
AA seq
458 aa
AA seq
DB search
MNEFSALPLSPALAPGIDALGYTVLTPIQAHSLPPILQGLDVIAQAPTGSGKTAAFGLGL
LQKLDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEA
HDPQVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGFEEPIREIASRCDKHRQS
LLFSATFPDSIRTLARELLKEPVEITVEGADSAPEIDQQFFEVDPTYRQKAVAGLLLRFN
PESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDV
AARGLDVEDLSAVVNYELPTDTETYRHRIGRTARAGKHGLALSLVAPRETARAQALETEQ
GQPLKWSRAPLATARPAQLPQAAMTTLRIDGGKTDKLRAGDILGALTGEAGLSGAAIGKI
AIYPTRSYVAIARAQVAKALAHLHAGKIKGRRFRVSKL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaattctccgcgctgccgctgtcgccggccctggcccccggcatcgacgccctt
ggctacaccgttttgactcccatccaggcgcatagcctgccgccgatcctgcaggggctc
gatgtcatcgcgcaggcgccgaccggcagcggcaagaccgccgcgttcggactgggcctg
ctgcaaaagctcgaccccgcgctcacccgcgcacaggcgctggtgctctgccccacccgc
gaattggccgaccaggtcggcaagcagctgcgtaagctcgccaccggtatccccaacatg
aagctggtggtgctcaccggcggcatgccgctcgggccgcagctggcctcgctggaagcg
cacgacccgcaagtggtggtgggtacgcccgggcgcatccaggagctggcccgcaaacgc
gccctgcacctgggcggcgtgcgcacgctggtgctggacgaggccgaccgcatgctcgac
atgggcttcgaagaacccatccgcgagatcgccagccgttgcgacaaacatcgtcagagc
ctgctgttttcggccacgtttccggacagcatccgcacgctcgcacgcgagctgttgaaa
gagcccgtcgagatcaccgtggaaggcgccgatagcgcaccggagatcgatcagcagttc
ttcgaggtcgacccgacctatcggcaaaaggccgtcgccggcctgctgctgcgcttcaat
cccgaatccagcgtggtgttctgcaatacccgcaaggaagtggacgaggtggcgggttcg
ctgcaggaattcggcttctctgcacttgccttgcatggcgacatggaacagcgcgaccgt
gacgaagtgctggtgcgcttcgtcaaccgcagctgcaacgtcctggtggccagcgacgtg
gccgcacgcgggctggacgtggaagacctttccgccgtggtcaactacgagctgcccacc
gataccgaaacctatcgccaccgcattggccgtaccgcacgcgccggcaagcacgggctg
gcgctgagcctggttgccccgcgcgaaaccgcccgcgcgcaggcattggaaaccgaacaa
ggccagccgttgaaatggtcgcgtgcaccgctggccactgcgcgtccggcgcaactgccg
caggcggcaatgaccaccttgcgcatcgacggcggcaagaccgacaagctgcgcgccggc
gacatcctgggcgccctgaccggcgaagccgggctctcgggcgcggcaatcggcaagatc
gccatctaccctacccgctcctacgtggccattgcccgcgcgcaggtcgccaaggcgctg
gcacacctgcacgcaggcaagatcaagggacgccggtttcgggtcagcaagctctga
DBGET
integrated database retrieval system
