Xiphophorus couchianus (Monterrey platyfish): 114133584
Help
Entry
114133584 CDS
T05908
Name
(RefSeq) caspase-1-like
KO
K01370
caspase 1 [EC:
3.4.22.36
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04148
Efferocytosis
xco04217
Necroptosis
xco04621
NOD-like receptor signaling pathway
xco04623
Cytosolic DNA-sensing pathway
xco04625
C-type lectin receptor signaling pathway
xco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114133584
09143 Cell growth and death
04217 Necroptosis
114133584
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
114133584
04623 Cytosolic DNA-sensing pathway
114133584
04625 C-type lectin receptor signaling pathway
114133584
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114133584
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xco01002
]
114133584
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114133584
Enzymes [BR:
xco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.36 caspase-1
114133584
Peptidases and inhibitors [BR:
xco01002
]
Cysteine peptidases
Family C14: caspase family
114133584
Membrane trafficking [BR:
xco04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
114133584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C14
FIIND
CARD
CDC45
PAXIP1_C
E7
Motif
Other DBs
NCBI-GeneID:
114133584
NCBI-ProteinID:
XP_027855413
LinkDB
All DBs
Position
18:23579562..23587934
Genome browser
AA seq
525 aa
AA seq
DB search
MAGLVLQKVKYRFVHKVSREVLRCLVDLLLEDQVLNGEEEDIICEGRYSRAGQARRLIDY
VIRQGERASTRLIDHLQNIDPVLHKALGLSSDQPGLSVQSTPSVPTVEDFLKTIRTNPEV
YPVTQTSLKNRVALLITNFKFSDKSMNRRGAEKDKKNMEKLLSNLGYEVVKYTNLTGKAI
DEALIYFTKHPKLKHTDSVFVVLMSHGKLGKILGVDWKEDKPDEFPINNIFKHLGSKSCP
ELRDKPKVIIIQACRGEHSAGYYVLQSEDHAADMLHHLILEKDFICFSSCVPDTVSYRQR
DRRSLLIQNIVEAFSPKSYQEDICGLFEKIEMATHCYLFDEQRMSKITRNTLTKHFYPLT
GIRKISVFVKEDKDTVTDAFSESEGSSYGTSTKVSSHEKEEQEEEEEDEEDEQEEEDEES
AHAFKFCCEKCKSITQTHGTKLVTPQRISNGRFQMQLEGEGSYECSVTGLVFEASESVLV
RYSVLSWSKFGSFLPNSWKFAGPIFDIDTVNKECSHPSTSPTLFA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtttggtacttcagaaagtgaaatatcgatttgtgcacaaggtgtccagagaa
gtacttcgttgtctcgtggacctccttttagaagaccaggttttgaatggagaagaagag
gatataatatgtgagggaaggtatagtagggccggtcaggcacgtcgtctcattgactat
gtgatcagacaaggagaaagagccagcacaaggctgattgatcacctacagaacatagac
ccagttcttcacaaagctctgggtctgtccagtgatcaacctggtctgtcagtccaatca
actccatctgtgccaactgtggaagacttcttgaaaaccataaggactaacccagaggtc
tatcctgtgacacaaacttccttgaagaaccgcgtagctctgctgatcactaatttcaag
ttttctgataaatcaatgaacagaaggggagcagagaaagacaagaagaacatggagaaa
ctgctttctaatctgggatatgaggtggtgaaatacacaaacctcactggaaaggcgatt
gatgaggctttaatttacttcactaaacatcccaaactaaaacacactgacagtgtgttt
gtggttctcatgtctcatgggaagctggggaaaattcttggggttgactggaaagaggac
aaaccagatgaatttccaatcaacaacattttcaaacacttgggctccaagagttgtcca
gagctaagagataaaccaaaggtcatcatcattcaggcctgcagaggagaacacagtgca
ggttattatgttctacaatctgaggaccatgcagcagacatgcttcatcatttaattttg
gaaaaagacttcatttgcttttcatcttgtgttcctgacactgtgtcgtacagacaacga
gatcgtaggtctctcctcatccagaacattgtggaggcttttagtccaaagtcgtatcag
gaagatatttgtgggctttttgagaagatagaaatggcgacacactgttacttatttgat
gaacaaaggatgtcaaagattactagaaacacactgacaaagcatttttaccccttaaca
ggaatcagaaaaataagtgtctttgtgaaggaagacaaagacacagttacagatgcattc
tcagaaagtgagggcagtagctatggaacatccactaaggtcagctcacacgagaaggag
gagcaggaggaagaagaggaggatgaagaagatgagcaggaggaggaagatgaagagtct
gctcacgcattcaagttctgctgtgaaaaatgtaaaagcatcactcagacccacggcaca
aagcttgttactccccagaggatttcaaacggacgtttccaaatgcagctggaaggagaa
ggctcatacgagtgttcggtcaccggtctggtttttgaagcaagcgagtcggttctggtg
cggtattcggtcttatcctggtccaagtttggctcgttcttacccaactcctggaaattt
gccggaccaatcttcgacatcgacactgtcaacaaggagtgctcacatccatccacctcg
cccactctgtttgcttag
DBGET
integrated database retrieval system
