Xiphophorus couchianus (Monterrey platyfish): 114140176
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Entry
114140176 CDS
T05908
Name
(RefSeq) tropomyosin alpha-4 chain-like isoform X1
KO
K09290
tropomyosin 3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04260
Cardiac muscle contraction
xco04261
Adrenergic signaling in cardiomyocytes
xco04814
Motor proteins
xco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
114140176
04820 Cytoskeleton in muscle cells
114140176
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
114140176
04261 Adrenergic signaling in cardiomyocytes
114140176
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114140176
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
114140176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
DUF3450
CENP-F_leu_zip
TMF_DNA_bd
Laminin_II
Cep57_CLD_2
CALCOCO1
DUF1664
Crescentin
ERM_helical
BST2
Fib_alpha
Laminin_I
DUF6872
DUF3540
FPP
Motif
Other DBs
NCBI-GeneID:
114140176
NCBI-ProteinID:
XP_027865699
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All DBs
Position
3:56320..67146
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AA seq
249 aa
AA seq
DB search
MSGGMNSVDAVKKKIKVLQDQAEEAEERAEQLQLEVEKEKRTREEAEGEVTSLSRRLQLS
EENLDRVQERLAAALRKLDEVEKVADESERGMKVIENRALKDEEKMEHLEVHLREAKLIA
EEADRKYEEVARKLVMVEGELERAEDRAEQADSKCRLVEEELKTVFTSAKSLEAQAEKYS
NKEDRYEGEIKNLSNKLKEAETRAEYAERTVAKLEKTIDGLEDALTSARNANMELQATLN
QTMEELNSC
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcgggatgaacagcgtcgacgcagtgaagaagaagatcaaggttctgcaggac
caggcggaggaggcggaggagcgggcggagcagctgcaactggaggtggagaaggagaag
aggaccagggaggaggcggagggagaggtgacgtctctgagccggcggctgcagcttagc
gaggagaacctggaccgggtccaggagcgtttggcagccgcactgcgcaagctggacgag
gtggagaaggtcgctgatgagagcgagagaggcatgaaggtgatcgagaaccgggctctg
aaggacgaggagaagatggagcacctggaggtccacctgagggaggccaagctgatcgct
gaggaggccgaccgtaaatatgaggaggtcgctcgcaagctggtgatggtggagggagaa
ctggagcgggccgaggaccgggccgagcaggcggacagtaagtgtcggctggtggaggag
gagctgaaaaccgtgttcaccagcgccaagtctctggaggcgcaggcggagaagtactcc
aacaaggaggaccgctacgagggagagatcaagaatctcagcaacaagctgaaggaggcg
gagaccagagccgagtatgctgagcgtacggtggccaaactagagaaaactattgatggc
ctggaagacgctctgacctcagctagaaacgccaacatggagctgcaggcgacgctgaac
cagaccatggaggagctcaactcctgctga
DBGET
integrated database retrieval system
