Xiphophorus couchianus (Monterrey platyfish): 114140622
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Entry
114140622 CDS
T05908
Name
(RefSeq) SLA class II histocompatibility antigen, DQ haplotype D beta chain-like
KO
K06752
MHC class II antigen
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04145
Phagosome
xco04514
Cell adhesion molecules
xco04672
Intestinal immune network for IgA production
xco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114140622
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114140622
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
114140622
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114140622
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114140622
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114140622
Exosomal proteins of epithelial cells
114140622
Exosomal proteins of breast milk
114140622
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
C2-set_2
Ig_3
Ig_2
Motif
Other DBs
NCBI-GeneID:
114140622
NCBI-ProteinID:
XP_027866532
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All DBs
Position
24:19986333..19994699
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AA seq
251 aa
AA seq
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MGPSLLLILLVLVQTADGFQSHSVSRCLFNSTELKDSWYIYSCIYNKVEFLRFDSNIGLY
VGYTSFGMRQANKLNNNPVALSRRRAQKEAFCHHNSGVLYRNVLNRSVAPSVTLSSVAPP
AGGHPTMLTCSVYGFFPKQIRVTWRRDGQEVISDVTSTAELPDGAWLYQIHSSLEFRPRS
GERISCRVEHVSLKEPLITDWDPSLPESERNKLAIGASGLILGLILSLAGFIYYKRKVKD
LVPVPTFESRS
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgggtccctctctgctcctgatcctcctggttctggtccaaacagcagatggttttcaa
agtcattcagtgtcccgctgcctctttaactccactgagctgaaggacagctggtacatc
tactcctgcatctacaacaaagtggagtttttgagatttgacagcaacattgggctctat
gtcggatacacgtcgtttggaatgagacaggcaaataagttgaacaataatcctgtggct
ctgagcaggaggcgagctcagaaggaggcgttctgccatcacaactctggggtcttgtac
agaaatgttttgaatagatcagtggctccgtctgtcactctgagctcagtggcgccccct
gctggtggacaccccaccatgctgacctgcagcgtctacggcttcttccccaaacagatc
agagtcacctggaggagagacggacaggaagtcatctctgatgtcacttccaccgccgag
ctgccagacggcgcctggctctaccagatccactccagcctggagttcagacccaggtct
ggagaacggatctcctgcagggtggaacatgtcagcctgaaggaacctctgatcaccgac
tgggacccgtccctgccagagtcagagaggaacaaactggccatcggagcttcaggactg
atcctgggtctgattttgtctctggctggattcatctactacaagaggaaggtcaaagat
ctggtccccgtccccacctttgaatccagatcctga
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