Xiphophorus couchianus (Monterrey platyfish): 114143406
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Entry
114143406 CDS
T05908
Name
(RefSeq) tropomyosin alpha-1 chain-like isoform X1
KO
K10373
tropomyosin 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04260
Cardiac muscle contraction
xco04261
Adrenergic signaling in cardiomyocytes
xco04814
Motor proteins
xco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
114143406
04820 Cytoskeleton in muscle cells
114143406
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
114143406
04261 Adrenergic signaling in cardiomyocytes
114143406
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114143406
04147 Exosome [BR:
xco04147
]
114143406
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
114143406
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of microglial cells
114143406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
Crescentin
TMF_DNA_bd
DUF745
DUF3450
Lebercilin
ATG16
Laminin_I
CENP-F_leu_zip
DUF16
SlyX
DUF1664
Motif
Other DBs
NCBI-GeneID:
114143406
NCBI-ProteinID:
XP_027871202
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Position
4:complement(10518385..10528903)
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AA seq
284 aa
AA seq
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MDAIKKKMQMLKLDKENALDRAEQAESDKKASEDRSKQLEDDLVALQKKLKATEDELDKY
SEALKDAQEKLELAEKKATDAEGDVASLNRRIQLVEEELDRAQERLATALTKLEEAEKAA
DESERGMKVIENRAMKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAELSESKCSELEEELKTVQNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgctatcaagaagaagatgcagatgctcaagcttgacaaggagaatgccttggac
agagctgagcaggccgagtcagacaagaaagcatctgaggacagaagcaaacagcttgag
gatgacctggtagcactgcagaagaagctgaaggccactgaggatgagttggacaaatac
tctgaggccctgaaggatgcacaggagaaactggagctcgctgagaagaaagccacagat
gctgagggtgatgtagcttccctgaatagacgcatccagctggttgaagaggagctggac
cgagctcaggagcgtctggccacagctcttaccaagctggaggaggctgagaaggctgcc
gatgagagcgagagaggcatgaaagtcattgagaaccgagcaatgaaggacgaggagaag
atggagctgcaggagatccagctgaaagaggccaaacacatcgctgaggaggctgaccgc
aaatatgaggaggtggcccgtaagctggtgatcattgagagcgacttggaacgtacagag
gagcgtgctgagctgtctgagagtaaatgctctgagctggaggaggagctgaagaccgtg
cagaacaacctgaagtctctggaggcccaggcagagaagtactcacagaaggaggacaag
tatgaggaggagatcaaggttctcacagacaagctgaaggaggctgaaactcgtgctgag
ttcgctgagagatcagttgccaagctcgagaaaaccatcgacgacctggaggatgagctg
tatgcccagaaactgaagtacaaggccatcagcgaggagctggaccacgccctcaacgac
atgacatccatctaa
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