Xiphophorus couchianus (Monterrey platyfish): 114145416
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Entry
114145416 CDS
T05908
Name
(RefSeq) syntaxin-3-like
KO
K08486
syntaxin 1B/2/3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
114145416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114145416
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114145416
Membrane trafficking [BR:
xco04131
]
SNARE
Syntaxin (Qa)
Stx-PM
114145416
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
114145416
Exosomal proteins of other body fluids (saliva and urine)
114145416
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
Relaxase_C
AAA_13
Baculo_PEP_C
IFT46_B_C
Tox-URI2
DUF1664
FlaC_arch
COG6_N
EzrA
ATG17_like
DUF6664
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
114145416
NCBI-ProteinID:
XP_027874774
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All DBs
Position
5:complement(7252593..7259138)
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AA seq
257 aa
AA seq
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MDDFFAQIEDIRTSIDKIDESVTEIKKLYSSVLSAPTPDQKTQDDVETLTNEIKKSANNA
RNKLKSIERQLESNTDERASADLRIRKSQHAILAKKFVEVMTKYNEAQVDFRDKSKGRIA
RQLEITGKKTTDEELEEMLEGGNSAVFTAGITESKINQQALNEIEARHKDIMRLESSIKE
LHDMFVDIAMLVENQGGMIDRIESNMDQSVGFVERAVADTKKAAKFQQEARRKQMMIFCC
CVILALILGSFLYSFIK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggacgacttctttgcacagattgaagatattcgcaccagcattgacaaaatcgatgag
agcgtgacagagattaaaaaactctactcctccgtcttgtcggcccccacgcctgaccaa
aaaacacaggatgatgttgaaactctcaccaatgagataaaaaagtcagccaacaacgca
agaaacaagctgaagagtattgagcgacaacttgagtcaaacacagatgaaagggcctct
gcagacctcaggatacgcaagtcacagcatgcaatactggctaaaaagtttgttgaggtt
atgacaaaatacaacgaggctcaagttgacttcagggataagagcaaaggacgaattgcc
cggcagcttgagatcacggggaaaaaaacaactgatgaggaactggaggagatgctagag
gggggaaattcagctgtcttcactgcagggatcacagagtccaagattaaccagcaggcc
ctgaacgagatcgaggcccgtcacaaagacatcatgaggctggaaagcagcatcaaggag
cttcatgacatgtttgttgatatcgccatgctggtggaaaatcagggcgggatgatagac
agaattgaaagcaacatggatcagtcggtggggttcgttgagagggcagtggcagacacc
aagaaggctgccaagttccagcaggaagcgcgccggaaacaaatgatgatcttctgctgc
tgcgtgattctggccctcatcctcggctcgtttctctacagtttcatcaaatag
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integrated database retrieval system