KEGG   Xiphophorus couchianus (Monterrey platyfish): 114148002
Entry
114148002         CDS       T05908                                 
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like isoform X1
  KO
K08285  midline 1 [EC:2.3.2.27]
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    114148002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xco04121]
    114148002
Enzymes [BR:xco01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     114148002
Ubiquitin system [BR:xco04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    114148002
SSDB
Motif
Pfam: COS SPRY zf-B_box fn3 zf-RING_UBOX PRY zf-C3HC4_4 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_5 zf-C3HC4_2 Pur_ac_phosph_N Inhibitor_Mig-6 Syntaxin_2
Other DBs
NCBI-GeneID: 114148002
NCBI-ProteinID: XP_027878679
LinkDB
Position
7:14525640..14569166
AA seq 689 aa
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPSELIQSISAFQCPTCR
YVITLNQRGLEGLKRNVTLQNIIDRYQKASLSGPNSPSETRRERVIPEGKAMTSPTDRVQ
CQFCEQDPPQDAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPLQDSHLRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHQVAALSDRYDKLKKFPGRLLCAGNDQSYQEA
DQQALDSNLSSLIKRTGELESLMGKLIQTCQNVEVNASRQENKLQEECDLLINIIQHRRQ
IIATKIKEGKAMRLRKLSQQIAGCKQCVERSSSLITQADQTLKESDHARFLQTAKSICER
VSMATASSQILLPEINLNDAFDTFALDFTREKKMLESLDYLTAPNPPSIREELCTASYDT
ITVHWTSDDEFSVISYELQYAIFTSQSNVVSLCNSVDSWMIAPNIKQNQYTVHGLQCGTN
YIFIVKAINQAGSRSSTPGKLKTNSQPFKLDPKSAHRKLRVSHDNLTVERDETSSKKSHS
QERFSSHSSYGVTGNVYIDSGRHYWEALIGGSTWFAVGIAYKSAPRHEWVGKNSASWVLS
RCNNSWVVRHNSKEIPIEPSPHLRRLGILLDYDSGSLSFYDAVASQHLYTFDIDFVHPVC
PVFNVWNRCLTVLSGLPIPDHLESTDFNH
NT seq 2070 nt   +upstreamnt  +downstreamnt
atggaaacactagagtctgagctgacctgcccaatctgtctggagctttttgaggaccca
ctgctgctgccctgtgctcacagtctttgtttcaactgtgcccatcgtatcttggtctcc
cattgcacccccagcgagcttatccagtctattagcgccttccagtgtccaacttgtcgc
tatgtcattactctcaaccagagaggcctagagggactcaaacgcaacgtgaccctacag
aacatcatcgaccgctaccagaaagcctctttaagtggacccaactcccctagtgagact
cgtcgtgagcgagtgatcccagaaggcaaagccatgacatctcctacggaccgagtgcag
tgtcagttctgcgagcaggacccccctcaggatgcagtgaagacctgtgttacctgtgag
gtatcgtactgcgaggaatgcctcaaggccacccacccaaacaagaaacccttcacgggc
caccggctgattgaacccttgcaggactcccatctccggggactcatgtgtctggagcac
gaggacgagaaagtcaacatgtactgtgtaacagacgaacagttgatctgtgccttgtgc
aaacttgtcggccgacatcgagaccaccaagtggcggcccttagcgaccgatatgacaaa
ctcaagaagtttcctggccgccttctctgtgcggggaatgatcagtcataccaggaggcg
gaccagcaagcattggactccaacctcagcagcttaatcaaaaggaccggtgaattagaa
agtttgatggggaaacttatccaaacctgccagaatgtggaggtaaatgcctcgcggcaa
gaaaacaagctacaggaggagtgtgacctgctgattaatatcatacagcatcgaagacaa
ataatagcaacaaagataaaggagggaaaggccatgaggctgaggaagctctctcaacag
atagcgggctgtaaacagtgcgtcgagagatcgtcctccctcatcactcaggctgaccaa
acccttaaggagagcgaccacgcccgcttccttcagacagctaaaagtatctgtgagaga
gtctctatggcaacagcatcctctcagatactgttaccagaaattaacctgaacgatgca
tttgatacttttgctctggacttcacgagagaaaagaaaatgctagaaagtttggattac
ctcacagcaccaaatccaccgtcaattcgtgaggaactgtgtacagcttcgtacgacacc
atcacggttcactggacatcagacgatgagttttctgttatttcatatgagcttcagtat
gccatcttcaccagccagtctaatgttgtcagtctgtgtaactctgttgatagttggatg
attgccccaaacattaagcaaaatcaatacaccgtgcatggactccaatgtggcaccaac
tacattttcatagtgaaggccataaaccaggctggaagccgcagtagcaccccggggaaa
ctcaaaaccaacagtcagccattcaaattggacccaaagtctgctcatcggaagctaagg
gtatctcacgataaccttacggtggagagagatgagacatcatctaaaaagagccacagt
caggagcgcttctccagtcacagcagctatggggttactgggaatgtctacatagacagc
ggccgccattactgggaagctctgattggaggaagcacatggtttgctgtggggattgct
tacaagtctgcaccaagacacgagtgggttggcaagaactcggcctcctgggtactctcc
cgctgcaacaactcgtgggtggtgcgccacaacagcaaggaaatccccatcgagccttcg
ccccacctgcggcgccttgggatattgttggattacgattcggggtcgctctccttctac
gatgctgtggcctcgcagcacttgtacacatttgacattgactttgttcatccagtctgc
ccggtgttcaatgtttggaatagatgtttgacggtcctcagtggactgcccatacccgat
catttggagagcacagactttaaccactga

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