Xiphophorus couchianus (Monterrey platyfish): 114151346
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Entry
114151346 CDS
T05908
Name
(RefSeq) sorting nexin-1-like
KO
K17917
sorting nexin-1/2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114151346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114151346
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114151346
Membrane trafficking [BR:
xco04131
]
Endocytosis
Macropinocytosis
Sorting nexins
114151346
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
114151346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
adh_short_C2
NAD_binding_1
Motif
Other DBs
NCBI-GeneID:
114151346
NCBI-ProteinID:
XP_027884308
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Position
2:complement(30959576..30972381)
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AA seq
743 aa
AA seq
DB search
MATSSERSPPPFPDSEDQDALDSEEVRGRDSDEDDGDELFLSAANTPMAKKESPSAPAGQ
LVDLLSDPLIEPLSSTTNEPSSELFEDLTNDTAVTAGKASDVASDEFVDILGSEAAAQRE
EVDVTVEAAAAAADKGETSRGATDLLTDGETRSATEQKATSAAPVMDLGGSQQPPASAKV
TNPLEDLLSDPPATATSNTHQPGGAVVDLFDDEGSDIFTGAPSSKPAKQPQKSLFGEADE
DLFGEPLGAVSKKAAGKEQKEKSVPASAGEPAHIFTEEAVGTVPNARAVDSKTNGIPPEE
DSDIFSEATVELSLDSPRSERRKEATTKPPVSASTSNSTSLAKPQSVAVEELEEEEEEEL
EDKFDIHVSVKDPEKIGDGMNAYMAYKVSTQTSLPMFRNKTFTVRRRFSDFLGLYEKLSE
KHGPNGLIVPPPPEKNLLGMTKMKVGKEDSSSADFLERRRGALERYLQRVVTHPMLLQDP
DVREFLEKEELPRAVSTQTLSGAGFLKMLNKATDAVSKMTIKMNESDVWFEEKLQEVESA
DQQFRKLHALVESLVVHRKELSLNTASFAKSAAMLGSAEDNTALSRALSQLAEVEDKMEQ
LHQDQAANDTFSFAEMIADFIRLLGAVRGTFDQRMKAWQRWQDAQAMLQKKRETEAKLLW
ANKPDKLQLAKEEIAEWEAKVTQYERDFERVSATVRKEVVRFEKEKTKNFKRQIIVYLES
LLQSQQQLIKYWEAFLPEAKAIA
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagctcagagcgcagtcctcctccgttcccggattccgaggaccaagatgct
ctggactccgaggaagtcagaggccgagacagcgacgaggacgacggggatgagcttttc
ttgagcgcggccaatacgcccatggccaaaaaggagagcccatcagcacctgccggtcag
ctcgttgacctcctgagtgaccctttgattgagcccctcagcagcacgacaaacgaaccc
tcctctgagcttttcgaggacctgacaaacgacacagccgtcacagcgggcaaggcgtcg
gacgtggcctcggatgagtttgttgacattctgggaagtgaagctgcagcacaaagagag
gaagtggatgttacggtggaagcagcagcagcagcagcagataagggtgaaacgagccgt
ggcgcaacagatttactcaccgatggagaaacgagaagtgccactgaacagaaagcgact
tctgccgctccagtcatggacctcggcggctcgcagcagccacctgccagtgcaaaggtc
accaacccgctggaggacctcctgagcgatccaccggccactgccacgtccaacactcac
caacccggcggcgcggtggtcgacctcttcgacgatgagggaagcgacattttcaccgga
gccccgtctagcaaacccgccaagcagcctcagaagagcctcttcggcgaagcggacgag
gacctgttcggcgagccgctgggcgccgtctcgaagaaagccgccggtaaggagcagaag
gagaaatccgtcccggcttcagctggagaacctgcacacatcttcaccgaggaggcggtc
ggcacggtgccaaacgccagagcggtcgactccaaaaccaacggaatccctcccgaagag
gactctgatatattttcagaagccacagtggagctttccctggacagtccgaggagcgag
agaaggaaagaggcgacgaccaaaccgcctgtttccgcctccacctcaaactcaaccagc
ctcgccaagccacagtcggtcgccgtggaagagctggaagaggaggaggaagaggagctt
gaagataagtttgacatccatgtctctgttaaagaccctgagaaaataggggacggcatg
aacgcctacatggcttataaagtatcaacacagacctctctgccgatgttccgcaacaaa
acgtttacggtgaggcgacgcttcagcgacttcctgggcctctacgagaagctttccgaa
aaacacggaccgaacggattgatcgttcctccgccgccagaaaaaaacctcctaggaatg
acaaaaatgaaggtgggaaaggaagattcgtcatcggcagactttctggagaggagaaga
ggagctttggaaaggtatctccagagagtagtgactcacccaatgctcctgcaggatcct
gatgtcagagagtttctggagaaagaggaactgcccagagccgtcagcacccagacgctg
agcggggccggcttcctgaagatgctcaacaaggcaacggacgccgtcagtaaaatgacc
atcaagatgaacgagtcggatgtgtggtttgaggagaagctgcaggaggttgagtctgca
gatcagcagttcaggaagctccacgctctggtggagtcgctcgtcgttcacagaaaagag
ctgtccctgaacacggcgagcttcgccaagagcgcggccatgctgggtagcgccgaggac
aacacggcgctgtcccgcgccctgtcgcagctggccgaggtggaggacaagatggagcag
ctccaccaggaccaggccgccaatgacaccttcagcttcgccgagatgatcgcagacttc
atccgcctgctgggagcggtcaggggcacgttcgaccagcggatgaaggcgtggcagcgc
tggcaggacgcgcaggccatgctgcagaagaagagggagacggaggccaagctgctgtgg
gccaacaagccggacaagctgcagctggccaaggaggagatcgccgagtgggaggccaaa
gtgactcagtatgagagagactttgagagagtttctgcaactgtgcgcaaggaagtcgtc
cgcttcgagaaagaaaagaccaagaatttcaagagacagataatcgtgtacctggagtct
ctgcttcagtctcagcagcagctgatcaagtactgggaggcgttcctgcctgaagcaaaa
gccatcgcctaa
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