Xiphophorus couchianus (Monterrey platyfish): 114152223
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Entry
114152223 CDS
T05908
Name
(RefSeq) B-cadherin-like isoform X1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04371
Apelin signaling pathway
xco04514
Cell adhesion molecules
xco04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
114152223
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114152223
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
114152223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114152223
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114152223
04090 CD molecules [BR:
xco04090
]
114152223
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
114152223
Cell adhesion molecules [BR:
xco04515
]
Cadherins
Major cadherins
114152223
CD molecules [BR:
xco04090
]
Proteins
114152223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_3
RET_CLD1
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
114152223
NCBI-ProteinID:
XP_027885845
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Position
2:complement(16573234..16580260)
Genome browser
AA seq
815 aa
AA seq
DB search
MKDMTGNRRILIVTLIFWQLKCLVSLDPAWTQLRFIGKIHNNTNSPNESNHEDDAASVLQ
LPEHPLADGLRRVKRDWVIPQINFPENVRGTYPKFLVTLKSSKAETVAITYKISGPGADQ
PPEGIFTVDDRSGMMYVTEPLDREKQAKYTLWAYALEVTGNAEQPLEIIINIIDQNDNKP
EFTQKVFTGRVSESAEVGKPILNVTAVDKDDPNTDNAIIRYRLLSQTPRMPKEEMFAINA
VSGLISLKEQGLDRETHPEYKLIIAAADMEGKGQITTCTAVITVTDSNDNAPNFTDTSMS
TTVHENAIGVEVARLKVTDMDESGSPNSNTKYSIIKGNEGGAFNITAGSNKMEGIITTAK
ELDFESLSEYKLLVVVTNEAPFSVPMSTSTATVTIKVIDRNEPPVFSPAKVHVTLSEDVR
VGTAVVQLKAKDPDTARAQRVIYKLYNDSAQWLSTNHSTGSVKVVSGMDRESQYVRESKY
TVLVLAYDDDLIPATGTGTLVVSLLDVNDHLPMVRQKTATLCNSDLFPALLDIVDLDGPG
HAGPFTVELIGGHKKNWTVKTNSTSNVAALYPKQNPSSGDYNVTMRIYDVGGLYKDSSLV
VEVCHCQAGVDACLPRPDRRQDIPSFATPLLGSVFGLLLLLLLLLLLLSRRRRAGKEAPL
LEDLTRDDIFCYSEEGGGEDDQDYDLSQLHRGLDNRPEVFSTDVFPTVFQALPGYRLQIQ
ANEEVCNFIEHNLQAANRDPTVPPYDSLLVFDYEGGSSDVDSLSSIQSSDSDEDQDFQSL
NQWGPRFSRLANLYAKGREEEDDDNQTLPGKSEWV
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacatgactggaaacaggaggattttgatagtgaccctcatattctggcaactt
aagtgtttggtatctctagatccagcatggacacaactgaggttcattggcaaaattcac
aataatacaaacagtccaaatgaaagcaaccatgaggatgatgctgcctcggttctccag
ctgccagagcatccactggctgacggactgaggcgggtgaagagagactgggttattcca
caaatcaactttccagaaaacgtccgcggaacatatcccaaatttctggtgacactcaag
tcaagtaaagctgaaacagtagccataacttacaagatcagtggcccaggtgcggatcag
ccccccgaaggtatttttactgtcgatgaccggtctggtatgatgtatgtgaccgagcca
ctggacagggagaaacaagccaaatacactctgtgggcttatgccctggaagtgacaggg
aacgcagagcagcccctggagatcatcatcaacatcattgaccagaatgacaacaaacca
gaattcactcagaaggttttcaccggcagagtgagcgaaagtgccgaagttggtaaaccc
atcttgaatgtaacagctgtagataaggatgatccaaatacagacaatgctataattagg
tatcgactactatctcagacacctagaatgcccaaagaggagatgtttgctataaacgca
gtgagtggactgattagtctgaaggaacagggactggatagagagactcatccagaatac
aaactgatcattgctgctgctgatatggaagggaaagggcagatcacaacctgcactgct
gtcattaccgttactgacagcaacgataatgctccaaatttcactgacacatctatgtcc
acaacagtccatgagaatgcgataggagtggaggtagcaagattgaaagtcaccgacatg
gacgagtcaggatctccaaattcaaacaccaaatactccatcatcaaaggcaatgaaggt
ggagcctttaacatcactgctggttcaaataagatggagggaataatcacaactgccaag
gagctggattttgagagcttgtctgagtacaaactgttggtggtggtaacaaacgaggcg
ccattttccgtccccatgtccacatccacagccacagtcacaataaaagtcattgacaga
aacgagcctcctgttttcagcccagccaaggttcacgtaaccctctcagaggacgtgaga
gtcggcacggccgtggttcagctgaaagcaaaggacccggacacagccagagcacagcgc
gtaatatacaaactctacaacgacagcgcccagtggctgagcaccaaccacagcactgga
tcagttaaagttgtgagcggcatggaccgagagtcgcaatacgtcagagaaagcaaatat
acagttttagttttggcttatgatgacgatcttattccagctacaggaactggtactctg
gttgtgagtttgttggatgtgaatgaccaccttccgatggtcaggcagaaaactgccact
ctgtgtaactctgacctttttcctgcactcctggacatagtggatctggatggaccgggt
catgctgggccatttactgtggagcttataggaggacataagaagaactggactgtcaaa
accaattccacaagcaatgtggcagctctttaccccaaacaaaacccatcttctggagac
tataatgttaccatgaggatttatgatgttggggggctctacaaagacagttcgctggtc
gtagaggtgtgccactgtcaagctggagtagatgcctgcttgccaaggcctgacagacgt
caagacattccttcttttgcaacccctcttctgggatctgtttttggccttctgttgctg
ctcctgctgctcctgttgctgctgagcagaaggaggagggcagggaaggaggcccctctc
ctggaagatctgacccgtgatgacatcttctgctacagtgaggagggaggaggtgaagac
gaccaggactatgatttgtcccagttgcacagaggactggacaaccgacctgaagtcttc
agcacagatgtgtttcctactgttttccaggctctaccggggtaccgtctgcaaatccaa
gccaacgaggaagtttgcaattttattgaacataacctgcaagcggcaaacagagacccc
acagttcctccatatgactctcttctggtgttcgactatgagggtggaagctctgacgtg
gattcactcagctccattcagtcttcagattcggatgaggatcaggattttcagagtttg
aatcagtgggggccacgcttcagcagactggcaaacctgtacgctaagggaagagaggag
gaagacgatgacaaccaaacactgccaggaaagtcagaatgggtctga
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