Xiphophorus couchianus (Monterrey platyfish): 114152375
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Entry
114152375 CDS
T05908
Name
(RefSeq) melanopsin-A-like
KO
K04255
r-opsin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
xco04030
]
114152375
G protein-coupled receptors [BR:
xco04030
]
Rhodopsin family
Vision
Opsin
114152375
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
7TM_GPCR_Srv
Git3
7tm_4
Motif
Other DBs
NCBI-GeneID:
114152375
NCBI-ProteinID:
XP_027886061
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All DBs
Position
10:5563265..5591479
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AA seq
557 aa
AA seq
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MDSRLHIGPVVPTPDPTGSAPWNISSINPHRLMEVSPVAPANQDAIVPAHAFSTVNVPAH
AHYTIGVVILAVGITGMLGNFLVIYAFCRSRSLRTPSNIFIINLAVTDFLMCLTQTPIFF
ITSMHKHWIFGKKGCELYAFCGALFGICSMMTLMVIAVDRYVVITRPLASLGVMSHRKAL
CFVAAAWVYSTGWSLPPFFGWSAYVPEGLMTSCSWDYMTFTPSVRSYTMLLFTFVFFIPL
FIIIFCYCGIFRAIRHTTRAITKINCEGRRDSAKRFHKMRSEWKMAKIALIVILLFVISW
APYSCAALTAFAGYANLLTPYMNSVPAVIAKASAIHNPIIYAITHPKYRSAISRYVPYLG
MLLCISGRDRYSSSSLQSTRRSTLTSQSECKGTGRHHTSSQSESESAHLSDTEEDCSSRT
PAGRLLSTEVRHASQRSKVSGHSAGASERTTALNPTDPAICHLSQLTTPTEPEDICMLEI
SRQPTSHLPATQDSMRREPGPKTVAKNPSSIIVTSISTPSILHSPPGFHGSLKVAKTVTP
VSKELLDIARLETTALP
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggactccagactccatatcggaccggtggttccgacaccggacccgaccggcagcgca
ccttggaatatcagctccatcaacccgcaccggctcatggaggtgtctccggtggcccca
gctaaccaggatgccatcgtcccggcccacgcgttttcgacggtaaacgtccccgcacac
gcccactacaccataggcgtcgtcatcctggctgtaggaatcacaggcatgctgggaaac
ttcctggtcatttacgctttctgcagaagtcggagccttcggacgccgtccaacatcttc
ataatcaacctggcagtcacagacttcctgatgtgtctcacccagacgcccatcttcttc
atcaccagcatgcataaacactggatctttgggaagaaagggtgcgaactgtacgcgttc
tgtggcgcgctgtttggcatctgcagcatgatgacactgatggtgatcgcagtggaccga
tacgttgtcatcacccggccgctggcctctctgggagtcatgtctcacagaaaagctctc
tgcttcgtggccgctgcctgggtctactccacgggctggagccttcccccgttcttcggc
tggagtgcctacgtccctgagggtctgatgacttcctgctcttgggactacatgaccttt
accccttcggtgcgctcctacaccatgttgctctttacatttgttttcttcattcctctc
ttcatcatcatcttctgctactgcggcatcttcagagccatccgccacacaacacgagcg
ataacaaagatcaactgtgagggaagaagagactctgcaaagaggttccataaaatgagg
agtgaatggaaaatggctaaaatcgccttaatcgtcattttgctgtttgtcatctcctgg
gctccgtactcctgtgcagccctcactgcatttgcagggtacgccaacttactgactcct
tacatgaattcagttcctgctgtgatcgccaaagcttcagccattcacaaccccatcatc
tacgccatcacgcatccgaaatacagatcggccatcagcagatatgtaccatatctgggc
atgttgctgtgcatcagtggcagggaccgctacagcagcagcagcctgcagtccacacgc
cgatcgacgctgaccagccaatcggagtgcaaaggcaccggccggcaccacacctcgtcc
cagtccgagagcgaatcagcgcacctctcggacaccgaggaggactgctcgtctcggacg
cctgccggtcgtctcttgtccactgaggtgcgccatgccagccagagatcgaaggtgagt
ggtcacagcgcaggagcgtctgagagaaccactgccctcaaccccacggacccggccatt
tgtcacctttcacagctcaccactccgacagagcctgaagacatctgcatgctggagatc
agccggcagccgaccagccacctgcctgctactcaggatagcatgaggagggagcccgga
ccaaagacggtggccaagaacccgtcgtccatcatcgtcacctccatatccaccccgtcc
atcctgcacagtcctcccggtttccacggcagccttaaagttgccaaaaccgtcactccg
gttagtaaggagctgctcgacatcgccagactggagacgacggcgttaccgtga
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