Xiphophorus couchianus (Monterrey platyfish): 114153693
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Entry
114153693 CDS
T05908
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03030
DNA replication
xco03410
Base excision repair
xco03420
Nucleotide excision repair
xco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114153693 (rfc3)
03410 Base excision repair
114153693 (rfc3)
03420 Nucleotide excision repair
114153693 (rfc3)
03430 Mismatch repair
114153693 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xco03032
]
114153693 (rfc3)
03036 Chromosome and associated proteins [BR:
xco03036
]
114153693 (rfc3)
03400 DNA repair and recombination proteins [BR:
xco03400
]
114153693 (rfc3)
DNA replication proteins [BR:
xco03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114153693 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
114153693 (rfc3)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
114153693 (rfc3)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114153693 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
114153693 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
ABC_tran
DNA_pol3_delta
AAA_11
Rep_fac_C
Motif
Other DBs
NCBI-GeneID:
114153693
NCBI-ProteinID:
XP_027888193
LinkDB
All DBs
Position
11:29232028..29236056
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWLDKYRPTSLGKLDYHKEQATQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLKELY
GPGVEKLRIEHQTIVAPSKKKIEINIIASNYHLEVNPSDAGNQDRVVIQELIKTVAQSQQ
IQSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMTTCRLILCSTSTSKVIGPIQSRCL
AVRVPLPSTEEVCSVLTSVCKKEGLLLPPELAKQISEKSGRNLRRALLMCEACRVQQYPF
SADQDVPEPDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPDIIIKGLVEELL
NNCDGQLKTEVAHLAAYYEHRLQLGSKAIYHLEAFIAKFMAMYKKFMEDGLDAMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtggctggataaatatcgaccaacgtctcttgggaaacttgactatcacaaa
gaacaagcgactcaactgaaaaacctggttcagtgcggcgactttcctcacttgttggtg
tacggaccatcgggagcggggaaaaaaacccgcatcatgtgtttgctgaaagaactgtat
ggaccaggggtggagaagcttcgcatagagcatcaaactattgtggctccatcaaaaaag
aaaattgagatcaacataatagccagcaactatcacttagaggttaacccaagtgatgcg
ggaaaccaggatcgtgtggtgatccaggagctgattaaaactgtggcccagtcccagcaa
atccagtccagcactcagagagagttcaaagtggtgctgcttacagaggtggacagactt
actaaggatgctcagcatgccttgcgacgcacaatggagaagtatatgactacctgtcgt
ctcattctctgctcgacatccacctcgaaggtcatcgggccgatccagagccgatgtctg
gctgtcagagttcctctgccgagcacagaagaggtgtgcagtgttctgacgtcggtctgt
aaaaaggaaggtctgctgctgccgcctgagctggccaagcagatcagcgaaaagtcgggt
cgcaacctccgcagagctcttctgatgtgtgaggcgtgcagagtgcagcagtatccattc
tcagcagatcaggatgtgccagagccggactgggaggtctacctgagagaaactgctaat
gccatcgtcagccagcagagtcctcagaggttgttggaggttcgagccaggctgtacgag
ctgctaacgcactgcatccctcctgatatcatcataaagggtttagtggaagaactactg
aataactgcgatgggcagctaaagacggaggtggcccacctggctgcttactatgagcac
cgactccaactgggcagcaaagccatctaccacctggaggcgtttattgcaaagttcatg
gccatgtacaagaagtttatggaagacggcctggacgccatgatgttttga
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