Xiphophorus couchianus (Monterrey platyfish): 114153977
Help
Entry
114153977 CDS
T05908
Name
(RefSeq) nuclear factor 7, brain-like
KO
K12012
tripartite motif-containing protein 35
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114153977
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114153977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_6
zf-RING_2
DUF4200
Gp58
Prok-RING_4
zf-Nse
zf-RING_10
zf-rbx1
DUF6768
DUF4094
Motif
Other DBs
NCBI-GeneID:
114153977
NCBI-ProteinID:
XP_027888487
LinkDB
All DBs
Position
12:5077085..5078911
Genome browser
AA seq
477 aa
AA seq
DB search
MAERALFDRFLSCHICSETFRDPVSLSCNHSFCSNCLQEFWEKTGNKNCPICKRSSKEDP
SINFSLKELADSFTEKLKGASTERGKEKKKEKEVVCEKHSEVPYWFCEDEQRAVCPVCEF
SLHQSHKVVPIEQAVSELKEQLKSDLKSLQDKRNKHEQVAKTYDDVIQHSKKQVLSTERQ
IRAEFNKLHQFLREEEESRLAALREEEEQKRKTIMREMKRFEDQISSLSDSISAVEEELQ
KDNVSFLRSYEATQSRARGQRSLPDPQLVSGALIDVAKHLGNLSFRVWEKMKVKVKFSPV
VLDPNTASGRLHLSDDLTNVRHGDKELQLPDNPERNTKYWNVFGSEGFSSGKHSWDVEVG
DHPQWAVGLAKESVDRKRERYPTSESGIWCLLHRDGKYSNGVGDTLRVKKSLQRIRVQLD
YDMGKVSFYDSEDMTLIYIHRDTFTEKLFPYFNVSPAGVAKTSDLKICQATFLFKKS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagagctctttttgatcgtttcctgagctgccatatttgttcagagactttc
agagatcctgtgtctctgagctgcaaccacagcttctgttcaaactgcctgcaggaattc
tgggagaaaactggaaacaagaactgtcccatctgtaaacgatcttcaaaggaggatccg
tccatcaacttctccctgaaagaactcgctgattcgtttactgagaagttgaaaggagct
tcaacggagaggggaaaagagaagaagaaagagaaggaggtggtgtgtgagaaacactcc
gaggttccttactggttctgtgaagacgagcagagagctgtgtgtcctgtctgtgagttt
tctctccaccagagtcacaaagtggttcctatagaacaagcagtcagtgagctgaaggag
cagctgaaatctgacttaaagtctctgcaggacaagaggaacaaacacgaacaagtggcg
aaaacatacgatgatgtgattcaacactccaagaagcaggtgttgtccaccgagagacag
atcagagcagagttcaacaagctccaccagttcctgagagaggaagaggagtccagactg
gcagctctgagggaggaagaggaacagaagaggaagactatcatgagagagatgaagagg
tttgaggatcagatctcctctctgtcagacagcatctctgctgttgaagaagagctgcag
aaagacaacgtgtcgttcctcagaagttatgaagccactcagagcagagccagaggtcag
aggtcactgccagatccacagctggtttcaggagctctgatagatgtggccaaacacctg
ggcaacctgtccttcagagtctgggagaagatgaaggtcaaggtgaagttcagccccgtc
gttctggacccaaacactgcaagtggacgactccatctgtctgatgatctgactaatgtg
agacatggagacaaagagctgcagcttcctgataatccagagagaaacactaaatactgg
aatgtttttggttctgaaggcttcagttcagggaaacacagctgggatgtggaggtggga
gatcatcctcagtgggctgttggtttggctaaagaatctgttgacaggaagagagaaaga
tatcctacatcagaaagtggaatctggtgtttattgcatcgtgatggaaaatacagtaat
ggagttggtgatactctcagagtgaagaaaagtctccagaggatcagagtccagctggac
tatgacatggggaaagtttccttctacgactctgaagacatgactctcatctacattcac
agagacactttcactgagaaactcttcccttatttcaacgtttccccagcaggtgttgcc
aaaacttctgatctcaaaatctgtcaagctacatttctttttaaaaaaagttaa
DBGET
integrated database retrieval system
