Xiphophorus couchianus (Monterrey platyfish): 114154174
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Entry
114154174 CDS
T05908
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
114154174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114154174
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114154174
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114154174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-ANAPC11
zf-UDP
Motif
Other DBs
NCBI-GeneID:
114154174
NCBI-ProteinID:
XP_027888812
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Position
12:complement(23799554..23856470)
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AA seq
642 aa
AA seq
DB search
MARPGSGLLVPMNGVGYPPQNLARVVVWEWLNEHGRWRPYSAAVCHHIENVLKGDARGSV
VLGQVDAQLSPYIIDLQSMHQFRQDTGTMRPVQRNFYEPSSAPGKGVVWEWENDNGSWTP
YDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMSQTNRQSQRKRRLRRRMDLAYPLI
MGSIPKSQSWPVGASSGQPCSCQQCILVNSTRAASNAILASQRRKLYGGTAGNSGTAGGL
GGVRQSNTFAGTSLWSPTSGSSGANHNNISVGGGQSKAEQVQSPLPSANFPCSPVMPSLS
SSHGHHALTINGQNNLNRPGTQRISMGTTRGAIPPGVPALPVKNLTGSGPVHPALAGMTG
ILMCAAGLPVCLTRAPKPILHPPPINKSDMKPVPGINGMRRKTKKKHLKRGKNPEDVVRR
YTEKIKVVPDEDCTICMERLAMSSGYEGILQHKGIKPESVGKLGKCGHMYHLLCLVAMYN
NGNKDGSLQCPTCKTIYGEKTGTQPPGKMEYHVIPHSLPGYSECKTIRIMYDIPAGIQTN
EHPNPGKKFSARGFPRHCYLPDNEKGRRVLKLLIMAWDRRLIFTIGTSSTTGESDTVVWN
EIHHKTEFGSNLTGHGYPDPNYLDNVLTELSAQGVGEDNLKD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccccgggtctgggctgctggtgcccatgaatggcgtggggtacccgcctcag
aacctggccagggtggtcgtctgggagtggctgaacgagcacgggcgctggaggccgtac
agcgcggcggtgtgccaccacatcgagaacgtactgaagggagacgccaggggaagcgtg
gttctcgggcaggtggatgcccagctctccccttacatcatcgacctgcagtctatgcac
cagtttcggcaggacacaggcaccatgaggcccgtgcagaggaacttctacgagccgtcg
tcggccccagggaaaggcgtggtgtgggagtgggaaaacgacaacggctcgtggacgccg
tatgacatggagatctgcgtgaccatccagaatgcctacgagaagcagcacccgtggctg
gacttgacctctctgggcttctgctacctcatcgacttcaacagcatgtcccagaccaac
cggcagagtcagcgcaagcgccgccttcggagacgcatggacctggcatacccgctcatc
atgggctccattcccaagtcccagtcgtggcccgtgggcgccagctctggccagccctgc
tcgtgccagcagtgcatcctggtgaacagtacaagagctgcctccaatgccatcctggcc
tcgcagcggcgtaagctctacggagggacggctggcaactcgggcaccgcgggaggcctc
ggcggcgtgcggcagagcaacaccttcgctggaacctccctgtggtccccgacgtccggc
tcctccggtgccaaccacaataacataagtgtgggaggtgggcagtcgaaagccgaacag
gtgcagtcgccgctgccttctgccaactttccctgctccccggtgatgccatcgctttca
tcctcccatggtcaccacgcgctcaccatcaacggacagaacaatctgaaccggccaggc
acccagcggatttccatggggaccaccagaggagccatcccacccggggttcctgcttta
ccagtgaaaaatctgaccgggtctggacctgtgcacccagcgctagcaggcatgacaggt
atcctgatgtgcgctgcaggtctacctgtttgtctgactcgagctccaaagcctatactg
cacccgccacccatcaacaagagcgacatgaagcctgtgccagggatcaatggcatgcgg
cgcaaaaccaagaagaagcacctgaagagaggtaaaaacccggaggatgtggtccgaaga
tacacagagaagattaaagtggtgccagacgaggactgtaccatctgcatggagaggctg
gcgatgtcatcgggctacgaaggcatcctgcagcacaaaggcatcaagccagaatcggtg
ggcaaacttggcaaatgtggtcacatgtaccatctgctgtgcctggtggccatgtacaac
aatggcaataaggacggcagcctgcagtgcccaacgtgtaagacaatctacggggagaaa
acaggcacccaaccccctgggaagatggagtaccacgtcatcccccactctctgcccggc
tactcggaatgcaaaaccatccgcatcatgtacgacatccccgccgggatccagaccaat
gagcaccccaaccccggcaagaagttcagtgcaaggggcttccctcgacactgctacctc
ccggacaacgagaaaggcaggagggtcctaaaactcctcatcatggcttgggaccgtcgc
ctcatcttcaccatcggcacatccagcaccacgggagagtcggacacggtcgtgtggaac
gagattcaccacaagacggagtttggctccaacctgaccggccacggctaccctgacccc
aactacttggacaatgtcttgacggagctgtcggcccagggcgttggagaggacaatctg
aaggactga
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