Xiphophorus couchianus (Monterrey platyfish): 114160382
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Entry
114160382 CDS
T05908
Name
(RefSeq) suppressor of SWI4 1 homolog
KO
K14859
ribosome biogenesis protein SSF1/2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xco03009
]
114160382
Ribosome biogenesis [BR:
xco03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
114160382
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Gene cluster
GFIT
Motif
Pfam:
Brix
7tm_1
Motif
Other DBs
NCBI-GeneID:
114160382
NCBI-ProteinID:
XP_027898760
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Position
16:complement(9169617..9175567)
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AA seq
860 aa
AA seq
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MGKSKTKNQKKSRGQAIHVAEDAYRSVPHSFVFHRGQVGKNVGQLVQDMRKVMQPYTAES
LKVRKKNLLKDFVSVAGPLGVTHFIIFGKTPDSINMRLARLPKGPMLYFKVLKYSLIKDV
VSSLKKHRMHEQQFTHHPLLILSNFGVDGMHVKLMATMFQNTFPSINVQKVNINSIKRCV
LFSFDPASQEIQFRHYSLKVVPVGMSRGIKKLMQEKFPNMSKFEDITELLVKGANLSESE
AEQDGEHNITELPQMYSGRGNMPSQQSAVRLTEIGPRMTLQLVKIQEGMGDGSILYHSMI
SKTEEEIQEILRRKEAKMKEKEERRKTQEQNVATKKEKREENKKKSLEGIKKKQAEAEED
SEVEDPGMQDDRPAAVESDDDVEYYRQAVGQEPDEDMFPGAKKRRRPEKSHDRAKKRKLS
PGKSKQPDSKSPKRKGAVGQHRDKTGKAPHGKGWKKSKDEEKAFGKKKRPPGKAFGSKRS
GERENKFSRKNFDGKRNKDKTFQTKGHKGKSGLKRKGAGGKQSFTRTKGKRSEDDRGAIP
VFSLFTNKIKENRMAVNFSECEKFQIGLLPTMYGVEFVVALAGNTFALWLLLIKEKRNWH
SGVVLSCNLAISDLLYILTLPLLIVYYALGKHWLFGEAVCKIERFLFTCNLYVSIFFIMT
ISVNRCIGIVCPFFTRLYVEPFHVKVISAILWIIVGVISSPMLKFASLCQHSYNNNTLCV
AFCHQTSDDRSDFIYRVFLAVFGCLVPFIVTFTSYCLLFRVVWKNVNITTLEKHKVALLV
SSVIVLYAVSFVPYHVYQVYHLYLRKSDPKSINCWVYKMYQVSKGLATLNMCIHPILYMA
VFDSIRVACCGKSSEDNPEG
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggggaaatcaaagactaaaaaccaaaagaaatcccgaggacaagccatccacgtggct
gaggatgcctacaggtctgtgccccactccttcgtgtttcatcgaggtcaggttggaaaa
aacgtgggtcagctcgtccaggacatgaggaaagtcatgcagccttacaccgcagagtct
ctgaaggtacggaaaaaaaatctccttaaggattttgtgtctgtagcaggacccctgggg
gtgacccacttcattatctttggtaaaactcccgacagcatcaacatgagactcgctcga
cttcccaaaggccccatgctttattttaaggtcctcaagtattcccttatcaaagatgtg
gtttcatcgttgaagaagcacaggatgcatgagcagcagttcacccaccatccacttctc
atcctcagcaactttggagtggatggcatgcacgtgaaactcatggccaccatgttccag
aacacgtttccctccataaacgtccaaaaggtaaacatcaacagcatcaagaggtgtgta
ctgttcagttttgacccagcatcccaggaaattcagtttcggcactatagcctgaaggtc
gtccctgtggggatgagccgaggaataaagaagctaatgcaagaaaagttccccaatatg
agcaagtttgaggatatcactgaactgctggtgaagggagcgaacttgtctgaaagtgaa
gccgagcaggacggcgagcacaacataacggagctgccacagatgtattccggaagaggc
aacatgccgtcccagcagagcgctgtccgtttgaccgaaatcggtcctcgaatgacgctg
cagctggtgaagatccaggaagggatgggagacgggagcattctttaccactccatgatt
tccaagacagaggaagaaatacaggagatcctgaggaggaaggaggcgaagatgaaggaa
aaggaggaacgcaggaaaacacaggagcaaaatgtggcgacgaagaaagagaaacgagaa
gagaacaagaaaaagagtctggaaggcataaaaaagaaacaagctgaagccgaggaggac
agtgaggtggaagatccagggatgcaggacgataggccagctgctgttgaatctgatgat
gatgtggagtactatagacaggctgtggggcaagaaccagatgaagatatgtttccgggg
gccaagaagaggcggcgtccagagaaatctcacgaccgagccaagaagagaaagctgtcc
cctggtaaatcaaaacaaccagattctaaatcaccaaaaagaaaaggtgcagttgggcag
cacagagacaaaacgggaaaagctcctcatggaaaaggctggaagaaatctaaagatgag
gagaaagcatttgggaagaaaaagcggcctccaggaaaagcatttggctctaagagatct
ggagagagggaaaataaattttcacgcaaaaactttgatggaaagagaaacaaggacaaa
acgtttcagacaaaaggtcacaaaggcaagtctggcctcaagaggaaaggtgcaggtgga
aagcaaagcttcacacggacaaaaggaaagcgctcggaggatgatcgaggagcaattcct
gtcttcagccttttcaccaacaaaataaaagaaaacaggatggcagtcaacttctctgaa
tgtgagaagtttcagattggcctgctccctaccatgtacggggttgagtttgtggtggcc
ttggcaggaaacacgtttgccctgtggctgctgctcatcaaagaaaaacgcaactggcac
tccggtgttgtcctctcctgtaacctggccatcagtgacctgctgtacatcctcaccctg
cctctgctgattgtctactacgcactggggaaacactggctgttcggcgaggctgtgtgt
aaaatcgagaggttccttttcacctgcaacttgtatgtgagcattttcttcatcatgaca
ataagcgtgaaccgctgcataggcatcgtgtgcccgttcttcacccgcttgtatgtggaa
ccttttcatgtcaaagtcatcagtgccatcttatggattattgttggagtcatctcgagc
cctatgctgaagtttgcttctctttgtcaacacagttacaataacaacacgttatgtgtg
gctttctgtcaccaaacgtctgacgacaggtcggactttatctacagagtgttccttgct
gtttttggctgtcttgttcctttcatagtaacttttacttcttactgtctgttgtttcgg
gttgtgtggaaaaatgtcaacataacgacacttgaaaagcataaagttgccttgttagtc
tcatcagtgattgtcctctatgctgtttcctttgtgccctatcatgtctaccaagtctat
catctgtatttgaggaaaagtgaccccaagagcataaactgttgggtctacaaaatgtac
caagtgtccaagggactggcaacgctgaacatgtgtatccatcccatactctacatggct
gtgtttgacagtattagagtagcatgctgtggaaagagctcagaagacaacccagaagga
tga
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