Xanthomonas campestris pv. raphani: XCR_4104
Help
Entry
XCR_4104 CDS
T01872
Name
(GenBank) glycogen synthase
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00500
Starch and sucrose metabolism
xcp01100
Metabolic pathways
xcp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
XCR_4104
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xcp01003
]
XCR_4104
Enzymes [BR:
xcp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
XCR_4104
Glycosyltransferases [BR:
xcp01003
]
Polysaccharide
Storage polysaccharide
XCR_4104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_4_4
TetR_C_20
Motif
Other DBs
NCBI-ProteinID:
AEL08962
UniProt:
G0CJA2
LinkDB
All DBs
Position
complement(4400167..4401699)
Genome browser
AA seq
510 aa
AA seq
DB search
MIPTSLKKSVRPRDARGRFIRHHERLPVALADTRGALFVVSEMADFIKAGGLGDVAAALP
RALRHRYDVRVLIPGYRAVLARAGKVEIVGRVLAHAALPACDIGRIVQSDGLPIYILLSK
ELFERDGSPYVSTSGSEFEDNAIRFATLSHAAAQIAAGRAGLGWRPRLLHLNDWPCALAA
AYVRWSGGTTPCLLTIHNLAYQGLVPYSMAAALGIPAERVSELEFYGQMSFLRGGIVHAD
HVNTVSVSYAQQITGPAQGCGLDRLLAGRAAKGALSGIVNGIDASWDPRTDEYLDSHFSV
NHWQGRQANAAQVRKAFGLRESTGPLFAVVSRLVHQKGLDLICEVAPQIVAAGGQIAVIG
GGEPEIEQQVAELTRRYPGQVGAFIGFEEGLARRMFAGADFLLMPSRFEPCGLSQMYAQR
FGCLPIAHATGGLIDTVDDGVTGFLFQQASAEALRRCLERAFRTFRLPSLLSAMRRAAML
RPSGWDVAGKKYISLYERTAATAPAVATVS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgacttcgctcaagaagagcgtgcggccgcgtgatgcgcgcggccgtttcatc
cgtcaccacgagcgtctgccggttgcactggccgatacgcgcggtgccttgttcgtggtg
tcggagatggcggacttcatcaaggccggcggcctgggtgatgtggcggcggcactgccg
cgcgcattgcgccatcgctacgacgtgcgcgtgttgatccccggctaccgcgcggtgctg
gcgcgcgcgggcaaggtggagatcgtgggccgtgtgctggcgcatgccgcgctgccggcc
tgcgacatcggccgcatcgtgcaatcggacggcctgccgatctacatcctgctgtccaag
gaactgttcgaacgcgatggctcgccgtatgtgagcaccagcggttcggagttcgaagac
aacgcaatccgctttgccaccttgtcgcacgctgccgcgcagatcgccgccggccgtgcc
gggctgggctggcggccgcgcctgctgcacctcaacgactggccgtgtgcgctggctgcc
gcctatgtgcgctggtccggcggcaccaccccgtgcctgctgaccatccataacctggcc
taccagggcctggtgccgtattcgatggccgccgcactgggcatcccggccgagcgcgtc
tcggagctggagttctacgggcagatgtcgttcctgcgcggcggcatcgtgcatgccgac
cacgtcaacacggtgagcgtcagctacgcgcagcagatcaccggcccggcgcagggctgc
gggctggaccgcctgctggccggccgcgccgccaagggcgcgctgagcggcatcgtcaac
ggcatcgacgccagctgggacccacgcaccgacgaatacctggacagccatttcagcgtg
aaccactggcagggccgccaggccaacgccgcgcaggtgcgcaaggccttcggtctgcgc
gagagcaccggcccgctgttcgcggtggtgtcgcgcctggtgcaccagaagggcctggac
ctgatttgcgaggtcgccccgcagatcgtggccgctggcggccagatcgcggtgatcggc
ggcggtgagccggagatcgaacaacaggtggccgagctgacccggcgctatcccggccag
gtcggtgcgttcatcggtttcgaggaaggcctggcgcggcgcatgttcgccggcgccgac
ttcctgctgatgccctcgcgcttcgagccgtgcggcctgagccagatgtacgcacagcgc
tttggctgcctgccgatcgcgcatgccactggcgggctgatcgacaccgtggacgacggt
gtcaccgggttcctgttccagcaggccagcgccgaagcgctgcggcgctgcctggagcgt
gccttccgcaccttccgcctgcccagcctgctgtcggcgatgcgccgcgccgcgatgctg
cggcccagcggctgggatgtggcgggcaagaaatacatctcgctatacgagcgcaccgct
gcaaccgcacccgctgttgcgacggtgtcatga
DBGET
integrated database retrieval system
