Xanthomonas citri subsp. citri A306: J151_04145
Help
Entry
J151_04145 CDS
T03584
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
xct
Xanthomonas citri subsp. citri A306
Brite
KEGG Orthology (KO) [BR:
xct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xct03016
]
J151_04145
Enzymes [BR:
xct01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
J151_04145
Transfer RNA biogenesis [BR:
xct03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
J151_04145
Prokaryotic type
tRNA splicing ligases
J151_04145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Hexapep
Gam
Motif
Other DBs
NCBI-ProteinID:
AJD70542
LinkDB
All DBs
Position
4660953..4662176
Genome browser
AA seq
407 aa
AA seq
DB search
MSTSQHFEFLHAEGSTTPIKGWVRGVPLEEQAHAQLRNIAAVPFVGPWVAVMPDVHLGKG
ATVGSVIPTRGAIIPAAVGVDIGCGMAAVRTTLRAADLPDNLAQLRASIERSVPVGNGRG
GEHRKLPDSIESRIAQSGLVQRLDAIKQQHKRIRTDKLDCQIGTLGGGNHFIEICLDGTD
AVWVMLHSGSRGTGNLIGTYFIERAREQLAHRVLGFHLPDKDLAFFMQGEPLFDEYVEAV
SWAQDYARENREAMMARVLAEMRHRLPKFQLEKLAVNCHHNYVQKETHGGEELLITRKGA
VSARAGELGIIPGSMGTRSYIVRGLGNADSFHSCSHGAGRVMSRTAARAQITLAQHREAT
AHVECRKDAAVIDESPAAYKSIDAVMAAQQDLVEVLHTLRQVVCIKG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgagtacatcgcaacactttgaatttctgcacgccgaaggcagcacgaccccgatcaag
ggctgggtacgcggcgtgcccctggaagaacaggcacatgcgcagctgcgcaatatcgcg
gcggtaccgtttgtcggtccgtgggtcgcggtgatgccagacgtgcatctgggcaagggc
gcaaccgtgggctcggtgattccgacccgtggcgccatcatcccggcggcggtcggcgtg
gatatcggctgcggcatggctgcagtgcgcaccacactgcgcgccgccgacctgcccgac
aatctggcgcagttgcgtgccagcatcgagcgcagcgtgccggtgggcaacggccgtggc
ggcgagcatcgcaagctgccggacagcattgagagccgcattgcgcagtccgggctggtg
cagcgcctggatgcgatcaagcagcagcacaagcgcatccgtaccgacaagctggactgc
cagatcggcacgctgggcggcggcaaccacttcatcgagatctgcctggacggaaccgat
gcggtatgggtgatgctgcacagcgggtcgcgcggcaccggcaacctgatcggcacgtac
ttcatcgagcgcgcgcgtgagcaactggcacatcgcgtgctgggcttccatctacccgac
aaggacctggccttcttcatgcagggcgagcccttgttcgacgaatacgtcgaagcggtg
tcgtgggcgcaggattacgcccgcgaaaatcgtgaggcgatgatggcgcgcgtgctggcc
gagatgcgtcaccgcctgccgaaattccagctggaaaagctcgcagtcaattgccaccac
aactacgtgcagaaggaaacgcacggtggcgaggaattgttgatcacccgcaagggagcg
gtgagcgctcgtgccggcgagctgggcatcattccgggtagcatgggcacgcgcagctac
atcgtacgtgggttgggcaatgccgacagtttccacagctgcagccacggcgcagggcgt
gtgatgagcaggaccgctgcacgcgcgcagatcaccctggcacagcatcgggaggccacc
gcacatgtggaatgccgcaaggacgcggcagtgatcgatgagtcgcctgcggcgtacaag
tccatcgatgcggtgatggcggcgcagcaggatctggtcgaggtgctgcacaccttgcgc
caagtggtgtgcatcaagggatag
DBGET
integrated database retrieval system
