Xenorhabdus doucetiae: XDD1_2246
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Entry
XDD1_2246 CDS
T03784
Symbol
xthA
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XDD1_2246 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xdo03400
]
XDD1_2246 (xthA)
Enzymes [BR:
xdo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
XDD1_2246 (xthA)
DNA repair and recombination proteins [BR:
xdo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
XDD1_2246 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Exo_endo_phos_3
YozE_SAM_like
Motif
Other DBs
NCBI-ProteinID:
CDG17945
UniProt:
A0A068QVP9
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All DBs
Position
2305622..2306428
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AA seq
268 aa
AA seq
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MKFISFNINGLRARPHQLTAIVEQHQPDVIGLQEIKVHDEMFPLEEVSKLGYHVFYHGQK
SHYGVALLTRQQPVNIRKGFPTDDDDAQRRIIMADIETSLGLLTVINGYFPQGESRDHPI
KFPAKEKFYQDLLSYLETNHSPQSNILIMGDMNISPTDFDIGIGENNQKRWLKTGKCSFL
PEEREWMERLKNWGFIDTFRAQHPEVNDQFSWFDYRSKGFDDNRGLRIDLLLASHPLAER
CISSGIDYAIRGMEKPSDHAPVWTEFNL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatatcattcaatatcaatgggctaagagcacgtcctcatcaactcactgcc
attgtggaacaacaccaacctgatgttatcggattacaagaaataaaagttcatgatgaa
atgtttcccctcgaagaagtcagcaaactgggttatcacgtcttttatcatggtcaaaaa
tcacactatggtgtcgccctgctgacccgtcaacaacccgtcaatattcgtaaaggtttt
cccactgatgacgatgatgcacagcgccgcattattatggccgatatcgagacttccctt
ggtttattgacggtaatcaatggctattttccgcagggagagagccgtgatcaccccatt
aaatttcctgcaaaagaaaaattttatcaggatctcttgtcttacctggaaactaaccac
tccccgcagtcaaatattctgattatgggtgacatgaacattagtcccactgattttgat
attggtattggagaaaacaaccagaagcgctggttaaagaccggaaaatgttctttcttg
cccgaagaaagagaatggatggaacgcctgaaaaactggggtttcattgatacattccgg
gcacaacaccccgaagttaatgaccaattttcgtggttcgactatcgttcaaagggattt
gatgataatcgtgggctacgcattgatttgctgcttgccagccatccattggcagaaaga
tgtatttcttcgggtatcgattatgctatccgtggcatggaaaaaccgtctgatcacgcc
ccggtttggacagaattcaacctataa
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