Xenorhabdus doucetiae: XDD1_3016
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Entry
XDD1_3016 CDS
T03784
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo00470
D-Amino acid metabolism
xdo00550
Peptidoglycan biosynthesis
xdo01100
Metabolic pathways
xdo01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XDD1_3016 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XDD1_3016 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
XDD1_3016 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xdo01011
]
XDD1_3016 (ddl)
Enzymes [BR:
xdo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
XDD1_3016 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
xdo01011
]
Precursor biosynthesis
Amino acid ligase
XDD1_3016 (ddl)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATPgrasp_ST
ATP-grasp
ATPgrasp_Ter
TTL
RimK
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
CDG18715
UniProt:
A0A068QXZ5
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All DBs
Position
complement(3210671..3211591)
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AA seq
306 aa
AA seq
DB search
MVDKVAVLLGGTSAEREVSLQSGQAVVAGLKEAGINAYSVDTKDFDVTKLKEAGFNKVFI
ALHGRGGEDGTLQGLLEFLQIPYTGSGVMASALSMDKLRTKQLWQGAKLPVSPYVVINSQ
QFEQINDSQLKEYVQELGLPLMVKPNLEGSSVGMTKVNEYAELRGALALAFKYDTDVLVE
KWLFGPEYTVGFLGDEALPSIRIQVPDVFYDYDAKYISNQTQYFCPSGLSAEKEQALLDI
ASKAYKALGCRGWGRVDIMDDGNGNFYLLEVNTSPGMTSHSLVPIAARQAGLSFSQLVAR
ILELAD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggttgataaggttgctgttctgttgggcggaacgtctgctgaacgcgaagtttcattg
caatcaggacaagcggttgtggctgggctgaaagaagcgggcattaatgcttattcagtt
gatacaaaagactttgatgtaactaaactcaaagaggcaggattcaataaagtctttatc
gcactgcatggccgtggcggtgaggatggtacattgcaaggcttgctggagtttttgcaa
attccttataccggcagcggcgtaatggcatcggccttgtcaatggataaattgcgcaca
aaacagctatggcagggggcaaaactgcctgtttcaccttatgttgtcattaattctcaa
caatttgaacagattaatgattctcaactcaaagagtatgttcaagaattaggtctacca
ttaatggttaaaccgaatctggaaggctccagtgtaggaatgaccaaggtgaatgagtat
gccgaattgcgtggcgcattggcgctggcatttaaatacgatactgatgtgttggttgaa
aaatggctgtttggccctgaatatacggtgggatttttgggggatgaggcgcttccttct
attcgtattcaagttccagacgtgttttatgattacgatgcgaaatatatttccaaccaa
acgcaatatttttgtccaagtggcttgagtgcggaaaaagagcaagcgctgttagatatc
gcatcaaaggcgtataaggcgctgggatgtcgtggttgggggcgagttgatatcatggat
gatggtaatggtaacttctatttgttggaggttaacacttcccctggcatgaccagccat
agtcttgtgcctattgctgcgcgtcaggctggactcagtttttcgcaactcgtcgcgaga
attttggagttagctgattaa
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