Xylella fastidiosa 9a5c: XF_1716
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Entry
XF_1716 CDS
T00033
Name
(GenBank) mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
xfa
Xylella fastidiosa 9a5c
Pathway
xfa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
XF_1716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xfa03400
]
XF_1716
DNA repair and recombination proteins [BR:
xfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
XF_1716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_29
CcmD
Motif
Other DBs
NCBI-ProteinID:
AAF84525
UniProt:
Q9PCR2
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All DBs
Position
1634849..1637560
Genome browser
AA seq
903 aa
AA seq
DB search
MQIESSHDYLIQTQSTSETFVTVHTPEGRFLQNIDMREKPEGGKGMAEHTPLMKQYFAAK
AEYPDLLLFFRMGDFYELFHQDARKAARLLDITLTQRGSSGGAPIPMAGVPVHAYEGYLA
RLIALGESVAICEQIGDPGLAKGLVERKVVRIVTPGTITDEVLLEERRDTLLMALSRSKN
CYGLAWADLAGGRFLVNEVNSEEALEAELARLEPAELLLPDEDAWPEYLQQRNGVRRRPP
WLFDADSGRRKLLAFFKLHDLSGFGIENNPQATAAAGALLGYIEETQKQRLPHLTSITME
TVGEAITMNAATRRHLELDTRVDGESRHTLLGVLDSTVTPMGGRLLRRWLHRPLRLREVV
RQRHAAVGSMIDRDLDNKLMETFRRLGDMERILTRVALRSARPRDISTLRDSLSLLPRLR
ELLNASDSPRLRVLYAELGEHDSTASLLVKAVAEQPPLKLTDGGVIASEYDVELDELRKL
SNNADQFLIDLETRERESSGISTLKVGYNRVHGYYIEISKGQADKAPVHYTRRQTLTNAE
RYITEELKAFEDKVLSARDRALVREKLLYEQLLDTVGAQLEPLKRCAAALSELDVLVCFA
ERAQTLDWVRPELEHTSCLHIEGGRHPVVEAVREQRFEPNDLDLHPERRMLVITGPNMGG
KSTYMRQNALIVLLAYIGSYVPASRALIGPIDRIMTRIGAGDDLARGQSTFMLEMTETSY
ILHHATAQSLVLMDEIGRGTSTYDGLALADAVARHLAHINRCYTLFATHYFELTALADET
YEGGLSGIANVHFDAVEHSERLVFMHTVKDGPANRSFGLQVAALAGLPAAAVAHARRRLA
ELEQRGRESHVSEITPLALDAPQQCSLFASAPSAAQEALVALHPDELTPKQALEALYRLK
ALL
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
ttgcagatcgaatctagccacgattatctgattcaaacccaaagcacctccgagacattc
gtgaccgttcataccccggaaggacgtttcttgcaaaacattgacatgagagaaaagccc
gaaggtgggaagggcatggcagaacataccccactgatgaagcaatacttcgccgccaag
gctgagtatccagacttacttttgttcttccgtatgggagatttttacgagctatttcat
caagatgctcgcaaggcagcgcggttactcgatatcacgttgactcagcggggtagttcc
ggtggtgctccgatcccaatggccggtgtacccgttcatgcctatgaaggctatttggcg
cggctcattgccctgggtgaatccgttgcgatttgcgaacaaattggagatccagggctt
gctaaagggttggttgaacgtaaggtggtacgcatcgtcactccaggtacgatcactgac
gaggtgttactggaggagcgtcgcgacactctattgatggccttatcacgcagtaaaaac
tgttatggcttggcttgggctgacttagccggtggccgtttcctggtgaacgaagtcaat
agcgaggaggcattagaagccgaactcgcacgtctggagccagctgagctgttactccct
gacgaggatgcctggccagagtatctacagcagcgcaacggtgtgcgtcgccgtccccca
tggttgtttgatgctgacagcggccgccgtaaattgctggcgtttttcaaactgcacgat
ttatccggcttcggtatcgaaaacaatccacaagccactgcggcggcgggtgcactcctt
ggctacattgaggaaacacagaagcagcgtctaccgcacctgacttcaattacgatggag
actgttggcgaagcgattacgatgaacgctgccacacgtcgccatttggagctggacacc
cgtgtggatggggagagccgccacactctgcttggggtgctcgatagtacggtgaccccg
atgggcggacggttgctgcggcggtggctgcatcggccgctgcggctgcgcgaggtggta
agacaacgtcatgctgccgtcgggagcatgatcgatagggatctcgataacaaactcatg
gagactttccgcaggcttggcgacatggagcggattttgacccgcgtggcattgcgctca
gcacgtccacgtgacatctccacattacgggatagcctcagcctcctgccacgtttacgt
gagcttctcaatgcatcggattccccgcgcttgcgcgtgttgtacgccgagctgggtgag
catgacagcaccgcgtctttattggtaaaagccgttgcagaacagccacccttaaagctg
actgatggcggtgtgatcgcctcagaatacgatgtcgaattggacgaactgcgtaagctc
tccaacaatgcggatcagttcttgatcgatcttgagacacgcgagcgtgaatccagtggt
atttctacgctgaaagtgggttacaaccgcgtgcatggttactatattgagatcagcaag
ggccaagccgacaaagcacccgtgcattacactcggcgtcagacactgactaacgccgag
cgctacatcacggaggaactgaaagcgttcgaagacaaagtattatccgcacgtgatcgt
gcgttggtgcgggaaaaattgttgtacgaacagctgctggacaccgtcggggcgcaactg
gaaccgctgaagcgttgtgccgctgcgttatctgagctagatgtactggtctgctttgct
gagcgtgcacagacattggattgggtgcgtccggagttggagcacacatcatgcttgcat
attgagggtggccgtcacccggttgtggaagcggtgcgtgaacagcgattcgagccgaat
gaccttgatcttcaccctgagcgccgcatgttggttatcaccggccccaatatgggaggc
aagtcgacctacatgcgccagaatgccttgattgtcctgcttgcttatatcggcagctac
gttccggccagccgcgcgctgattggaccgattgaccgcatcatgacccgtatcggtgct
ggtgatgacctggcccgaggtcagtcgacatttatgcttgagatgacagagaccagctac
attctgcaccatgcgaccgcgcagtcgctggtactgatggacgaaattggtcgggggacc
tcgacttacgatggcttggcgttggcggatgcagtcgcacgccacttagctcatatcaac
cgttgttatacgctgtttgctacgcattattttgagctgactgcactagccgacgaaaca
tatgagggaggtctgagcggtatcgctaacgtgcatttcgatgctgtcgaacatagtgaa
cgcttggtgttcatgcacacagtgaaggatggcccggccaatcgcagttttggcctacag
gtggctgctttggctggtctaccagctgcggccgtcgcacacgcacggcggcgtttagct
gaactggagcagcgaggccgtgaaagtcatgtttcagaaataacaccgctggcattggat
gcaccgcagcagtgcagtttatttgcgtcggcgccctcagcagctcaggaagcattggtt
gcattgcatccggatgagttgacccctaagcaagcactagaagcgctttaccgactcaaa
gcgctgctataa
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