Xylella fastidiosa subsp. fastidiosa GB514: XFLM_01555
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Entry
XFLM_01555 CDS
T01979
Name
(GenBank) RNA-binding S4 domain-containing protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
xff
Xylella fastidiosa subsp. fastidiosa GB514
Brite
KEGG Orthology (KO) [BR:
xff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xff03009
]
XFLM_01555
Enzymes [BR:
xff01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
XFLM_01555
Ribosome biogenesis [BR:
xff03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
XFLM_01555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ADN62314
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Position
321703..323262
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AA seq
519 aa
AA seq
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MSDTPKPPSNTLSLKRETATEAPKLEERLHKVLAQAGLGSRRALEQRISNGLIKVNGDIA
QLGMSVKSGDKIELDGRSFVASALTEPARVLIYNKPEGEVTTREDPEGRPTVFETLPVLK
GARWIAIGRLDINTTGLLLLTTDGELANAMMHPSSEIEREYVVRVRSPEGEEHVQDELLE
QLTRGVMLEDGTAKFDTIERIGNTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRTR
YGSVLLPRELLRGQSTELPKTQVEALRTQLKLEKDMPLALTLQPVIGQRRSAKATLHVNR
NDNNKHAYHNNHSTADESRELRRFDTLRDDRGRGQGKHHFKDRLTVSGEAAAKQAHKPFK
QYKPKNDRSLSEGSPATFQSWYVPEGVSTGPRNHRNAGAGNGAHPNKKAQTQTPVTHRDN
KHASLHTNTRTMHPTSPPTTPRQPSTPMATLVRKQEQANQTTAVANTTGIGDQDTHNHST
LISPIETSQAFTTTFPPYKRLKPNQSPTNNLAFRNINTH
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataccccaaaaccaccatcaaacacactttcactcaaacgcgagacagccaca
gaagcaccaaaactggaagagcgcctgcataaagtgcttgcccaagcgggtctaggttcc
cgccgtgccctggaacaacgcatctccaacggactcatcaaagtcaatggagacattgcg
cagctcggcatgtccgttaaaagtggcgacaaaatcgaactggacggccgcagcttcgtc
gccagcgccctcactgaaccggcgcgcgtactgatctacaacaaaccagaaggcgaagtg
accacacgcgaagacccagagggtcgccccactgtgttcgaaacactccccgtcctcaaa
ggcgcacgttggatcgccatcggccgcctggatatcaacaccactggcttattactgctc
accacagacggcgaacttgccaatgcaatgatgcacccctcatcggaaatagaacgcgaa
tatgtcgtacgtgtacgctcccccgaaggagaagaacatgtgcaggatgagctactcgag
caacttacgcgcggcgtcatgctggaagacggcaccgcaaaattcgacacgattgaacgc
atcggcaacaccgactcacacgactggtttcgtgtcgtcgtcaaagaaggccgcaaccgc
gaagtacgtcggctatgggaatcgcaaggctgccaagtcagccgcctcaaacgtacacgt
tatggttccgtcctcctaccacgcgaactactgcgtggccaatcgaccgaactacccaag
acccaagtagaagcactacgcacccaactgaaactagaaaaagacatgccgttagcactc
accctgcaaccggttatcggccaacgccgttcagccaaagccacgctgcacgtgaatcgc
aacgacaacaacaaacacgcctaccacaacaaccacagcaccgccgatgaaagtcgcgaa
ctgcgtcgctttgacaccctgcgtgatgaccgaggtcgcggccaaggcaagcaccacttc
aaagatagactgactgtcagtggtgaagctgccgcaaaacaagcacacaaacccttcaaa
caatacaaacccaagaacgaccgttcgctatcggaaggcagcccggcaacattccagagc
tggtacgtccctgaaggcgtcagcaccggcccccgcaaccaccgcaatgctggtgctggc
aatggtgcccaccccaacaaaaaagcccaaacccaaacacccgtaacacacagggacaac
aaacacgcaagtctccatacaaatacacgaacaatgcacccaacttcccctccgaccacg
ccacgccaaccttcaacccctatggcaaccctggtcagaaaacaggagcaggccaaccaa
acaacagcggtggcaaatacaaccggaatcggggaccaagatacccataatcattcaacc
ctcattagccccattgaaacatctcaagcattcaccaccacattccccccttacaaacgc
ttgaaaccaaatcaatcaccaacgaataaccttgcattccgcaacatcaatacccattga
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