Xylella fastidiosa Hib4: XFHB_12500
Entry
XFHB_12500 CDS
T04925
Definition
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
xfh
Xylella fastidiosa Hib4
Pathway
xfh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xfh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XFHB_12500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xfh03400
]
XFHB_12500
Enzymes [BR:
xfh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
XFHB_12500
DNA repair and recombination proteins [BR:
xfh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XFHB_12500
Prokaryotic type
XFHB_12500
SSDB
Motif
Pfam:
UDG
Other DBs
NCBI-ProteinID:
ALR07532
UniProt:
A0A1L2AIU9
LinkDB
Position
complement(2709731..2710492)
AA seq
253 aa
MNEQGEAINNSAESRIQLESSWKAHVGNWLLRPEMRDLSAFLRARKVAGVSVYPPGSQIF
AAFEATPFQRVKAVILGQDPYHGQGQAHGLCFSVRPGMPLPPSLLNIYKELEEDLGLLRP
DHGCLLPWAKRGVLLLNAVLTVEDGRAGAHQGKGWEGFTDHVVDTLNREREGLVFMLWGS
YAQAKGKVIDTRRHLVLKAAHPSPLSAHRGFLGCRHFSLCNQYLSQHGLGMVDWSLPPCI
ALDGAILNGRIAV
NT seq
762 nt
+upstream
nt +downstream
nt
atgaacgagcaaggtgaggccattaataatagtgccgagtctcgaattcagttggaatct
tcttggaaggcgcacgttggtaattggttattgcgtccggaaatgcgggatttgtctgcc
ttcctgcgtgcgagaaaggttgctggtgtgagtgtctacccaccgggatctcagatattt
gcggcgttcgaagcgaccccattccagcgggtcaaggctgtaatccttggtcaagatcct
tatcacggtcaaggccaagcgcatggtttgtgtttttcagtgcggccaggtatgccgttg
ccgccttctttgttgaatatttataaagagctcgaagaagatcttgggttgcttcgccct
gatcatggctgtctgcttccttgggcaaagcgtggtgtattgctacttaatgcggtactg
acggtggaggatggtcgtgcaggtgcgcatcagggtaagggctgggaaggttttaccgac
catgtcgttgataccttaaatcgcgagcgtgaaggacttgtattcatgctctggggtagc
tatgcccaagccaagggtaaggttattgatacgcgtcgccaccttgtactcaaggctgcg
cacccttcacctttgtcagcgcatcgtggttttctgggttgccgtcatttttctctctgc
aaccagtacttgagccaacatggcttggggatggtggattggagcttgccgccatgtatt
gcactggatggtgcaatcttaaatggtagaatagcggtgtag
DBGET
integrated database retrieval system
