Xylella fastidiosa MUL0034: P303_11110
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Entry
P303_11110 CDS
T03317
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
xfl
Xylella fastidiosa MUL0034
Pathway
xfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P303_11110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xfl03019
]
P303_11110
Enzymes [BR:
xfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
P303_11110
Messenger RNA biogenesis [BR:
xfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P303_11110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
HEM4
P-loop_SecA
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AIC14094
UniProt:
A0A060HBE7
LinkDB
All DBs
Position
complement(2210498..2211838)
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AA seq
446 aa
AA seq
DB search
MNFETLGLLPSLLRALSEQGYEIPTPIQQQAIPLALAGHDLLAAAQTGTGKTAAFGLPVL
QRLMAASSNVGAGKPRALVLTPTRELATQVHDSLRGYAKYQRVSSAVIYGGVGMGNQLDV
LRRGVDLLIACPGRLIDHIERRSVDLSGVGILVLDEADRMLDMGFLPSIKRILGKLPRQN
RQTLLFSATFAEPIKQLALEFMCRPREVMVASHNTVAETITHRVHPVDVSRKRELLLYLL
AQDSREQTLVFVRTKHGSDKLATFLEKYGIKTAAIHGNKTQGQRLRALNSFKAGRVTVLV
ATDIAARGIDIDQLPKVINYDLPMVAEDYVHRIGRTGRNGVQGEAISLVTQEDAKLLRQI
VRLLDRDMDIRDVPDFEPQVPIRWGNSAPGKSKQPAGQHPPRKSQHRRAFGKASVHTTPA
LKKQSGVQHSNGSRNRDGMLPVHQRG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgaaactttgggattgttgccttccttacttcgtgctcttagcgagcaaggt
tacgaaataccgaccccaattcagcagcaggcgattccattggcattagctggccacgat
ttgcttgctgccgcgcaaacagggacaggtaagacggctgcgttcggcttgcctgtattg
caacgattgatggctgcttcatctaatgttggtgccggtaagccgcgtgctttggtgctg
acaccgacccgtgagctggcgactcaggtccacgacagcctacgtggttacgccaagtat
caacgtgtatcaagtgcggtgatttatggtggtgtggggatggggaatcagttggatgtg
ctgcgccgtggcgtagatttgttgattgcctgcccgggtcgtttgattgatcatattgaa
cgtcgcagtgtggatttgtcaggcgtcgggattttggtattagatgaggctgatcgcatg
cttgacatgggtttcctcccctcaattaaacgtatcctcggcaaactaccgcggcagaat
cgccaaactctgctgttctctgcgacatttgctgagccgattaaacagttggcgttagag
tttatgtgccgcccacgcgaggtgatggtggcgtcgcataacaccgttgctgagaccatt
acgcatcgtgtgcatcctgtcgatgttagccgcaagcgtgaattgttgttgtatctattg
gctcaagatagcagggagcagacactggtgttcgtgcggaccaagcatggcagtgacaag
cttgctacgttcttggagaaatacggaatcaagacagcggcgattcacggtaataagact
cagggccagcgtctgcgtgcattaaacagtttcaaagcagggcgagttaccgtgctggtg
gccactgacattgctgcgcgcggaattgatattgaccaattgccaaaagtgatcaattac
gatttgcctatggtggctgaggattatgtgcatcgcatcgggcgtactggacgcaatggt
gtgcagggagaggcaatttcattagtcactcaggaggatgctaagttattgcgtcagatc
gtgcgtttgcttgatcgtgacatggatattcgcgatgtgccggatttcgaacctcaagtc
ccgatccgttggggtaacagtgctccgggaaagagtaagcagcctgctggacagcaccca
ccacgtaagagtcaacatcggcgagcattcggcaaagcatctgtgcatacgacgcctgct
ttaaaaaaacaatcaggtgtacaacatagcaatgggtcccgtaatcgtgatggaatgctc
ccggttcatcagcgtggttga
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