Xylella fastidiosa M12: Xfasm12_1013
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Entry
Xfasm12_1013 CDS
T00677
Name
(GenBank) Glycine--tRNA ligase
KO
K01879
glycyl-tRNA synthetase beta chain [EC:
6.1.1.14
]
Organism
xfm
Xylella fastidiosa M12
Pathway
xfm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xfm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Xfasm12_1013
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xfm01007
]
Xfasm12_1013
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xfm03016
]
Xfasm12_1013
Enzymes [BR:
xfm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
Xfasm12_1013
Amino acid related enzymes [BR:
xfm01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Xfasm12_1013
Transfer RNA biogenesis [BR:
xfm03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Xfasm12_1013
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
DALR_1
Motif
Other DBs
NCBI-ProteinID:
ACA11978
UniProt:
B0U7B2
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All DBs
Position
1093679..1095847
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AA seq
722 aa
AA seq
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MTELKPLLIELGTEELPVNALPSLSRAFFEGVLAGLERRGIVIDHGEAKSLSTPRRLAVL
LTAVAVEQPKQYRELFGPYLNTAFDTEGKPTKALEGFAAKCGVNWRTLERIRDTKGERFV
HRVVVPGERTDALLPGILTEAIAGMPIPKPMRWGAHEYLFARPVHWLVMLFGQDVVEAEI
MGVKAGRISRGHRFLYDKPVSLSDPQNYIDVLQAAYVLVDPAARRARIVAEIEAVARQVG
GVARITEDNVAQVVNLVEWPSAVLCSFERVFLEVPQEALIQTMEVNQKFFPVLDSLGKLT
EKFIGIANIESNDVAEVAKGYERVIRPRFSDAKFFFNEDLKQGLKAMGERLRTVTYHAKL
GTLADKVARVLVLAEAIAPQIGVDPLLARRVALLSKNDLQSRMVNEFPELQGVAGHHYAL
ISGELPEVAMAIEDAYRPRFSGDEIARSPLGKVLGLAERLDTLACGFAVGMKPTGNKDPF
GLRRNALGLARTIIESRFDLDLKVLLDQASDWVAFATTIEQERHAQESVKQSKKEAAVKH
SLPQVSDEKSARIEELYDFIVERLRGYYADKGIPTTHFNAVAELKPVSLYDFHRRLDAIG
RFAALPEAEALAVANKRIRNILRKAEIKIPASVDATLFDQPAESGLLVALEGVITDTRSA
LDCKNYVSVLTCLARLRPPIDEFFDKVMVNDENLMLRANRLALLQRLGEYLCCVAAIEHL
SN
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgactgaactaaaaccactgctgatcgaacttgggaccgaggaattgccggtcaatgct
ttgccgagcttgtcgcgagcatttttcgagggggtgctggctgggttggagaggcgcggc
attgtgatcgatcatggtgaggccaagtctctgtcgactccgcgtcggcttgctgtgtta
ctcacggctgtggcagtggagcagccaaagcagtatcgcgaattgtttggcccttatctg
aataccgcgtttgataccgaaggtaagcccacgaaagcgttggagggatttgctgctaaa
tgtggtgtcaattggaggacattggagcgtattcgtgataccaagggcgagcgtttcgta
catcgggtggtggtgcctggcgagcgtacggatgcgttgttgccaggaatattgactgaa
gcaattgcggggatgcctattcccaagccgatgcgctggggtgctcatgaatatctattt
gcacgtccagtccattggttggtgatgctttttgggcaggatgtggttgaggctgagatc
atgggggtgaaggctggtcgtatcagtcgtggtcatcgctttttgtatgacaagccggtg
tcgctgagtgatccgcagaattacattgatgttcttcaggctgcgtatgtgttggtggat
cctgccgcacgtcgtgctcgcattgttgctgagattgaggccgtagcgcgtcaggttggt
ggagtcgcgcggatcactgaagataatgtggcgcaggtggtgaatttggtggaatggccg
tcggcggtgctatgtagcttcgagcgtgtgtttcttgaagtgccacaggaggcgttgatc
caaacaatggaggtgaatcagaaattttttcctgtactcgatagtttggggaagttgact
gagaagttcatcggtattgccaatattgagtccaatgatgtcgctgaggtcgcaaagggc
tatgaacgtgtgatccgtccgcgtttttctgatgctaagtttttcttcaatgaggatctc
aagcaaggtttgaaggcaatgggggagcgactaaggacggtcacctatcatgcgaagtta
ggtacgctggctgacaaggttgcgcgagttctggtactggctgaagcgattgcgccacag
attggggtagatccattgcttgccaggcgtgttgcgttgctcagtaaaaacgacttgcaa
tctcgcatggtcaatgagtttccggaattgcagggagttgcgggtcatcactatgccttg
attagtggtgagttacccgaggtcgcaatggcgattgaggatgcttatcggcctcgcttt
tctggtgatgagatcgcacgttcgccgttgggtaaggtgctcggactcgccgagcgtctg
gatacgctggcgtgtggttttgctgtgggaatgaagccaactggtaacaaggatcctttt
gggttacgccgcaatgcgttgggattggcaagaacaattattgagagtcggttcgatctg
gatttaaaagtgctactggatcaagcgtcagactgggtcgcgtttgcgacgacgattgag
caggagcgtcatgcacaggaatcagtgaaacagtcgaaaaaagaagcggctgttaagcat
tcactgccccaggtcagtgatgagaaatctgcaagaattgaagagctttacgatttcatc
gtagagcgtttgcgtggttactatgcggataagggcattccaacaacgcactttaatgca
gtcgctgagcttaaacctgtctctttatacgattttcatcgccgtcttgatgcaatcggc
agatttgctgctcttccagaggcagaggcgctggcagttgccaacaagcgtatccgtaat
attttgcgtaaggctgaaattaagattccagcatcagtcgatgcgacattgttcgatcaa
ccagcagagagcgggttactcgtggcgttggaaggtgtgattaccgatacccgcagtgca
ttagattgcaaaaattatgtcagtgtccttacatgtctggcacggttacggccacccatt
gatgagttcttcgacaaggtgatggttaacgatgaaaatttgatgctgcgtgctaaccgc
ttagcgttactgcaacgcttaggggagtatctgtgttgtgttgcggccattgaacacttg
tctaattga
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