Xylella fastidiosa M12: Xfasm12_2249
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Entry
Xfasm12_2249 CDS
T00677
Name
(GenBank) Isocitrate dehydrogenase (NADP(+))
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
xfm
Xylella fastidiosa M12
Pathway
xfm00020
Citrate cycle (TCA cycle)
xfm00480
Glutathione metabolism
xfm01100
Metabolic pathways
xfm01110
Biosynthesis of secondary metabolites
xfm01120
Microbial metabolism in diverse environments
xfm01200
Carbon metabolism
xfm01210
2-Oxocarboxylic acid metabolism
xfm01230
Biosynthesis of amino acids
Module
xfm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xfm_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
xfm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Xfasm12_2249
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Xfasm12_2249
Enzymes [BR:
xfm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
Xfasm12_2249
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GFIT
Motif
Pfam:
IDH
TPP_enzyme_N
Motif
Other DBs
NCBI-ProteinID:
ACA13099
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Position
complement(2378394..2380625)
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AA seq
743 aa
AA seq
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MSSTPKLIYTLTDEAPFLATQSLLPIIKAYTKVAGIQVETRDISLAGRILAQFPDVLTET
QRVSDDLAELGEMTASPDANIIKLPNISASMPQLKAAIKELQEQGYLLPDYPDEPKNSAQ
KDVKMRYDRVKGSAVNPVLREGNSDRRAPLSVKNYVRKYPHRMGAWSTTSKSHVAHMDGG
DFFGSERSAVLAQAGMLKVELIAKDGTVTVLKDKVAVSAGDIVDAAVLSKQALAVFVAAQ
MNDAKSQGVLFSVHLKATMMKVSDPVIFGVFVSEFYKEALAKHADTLKQVGFDPNNGIGD
LYARIVALPEEMQAVIRADVQAQYAKRPGLAMVNSGKGITNLHVPSDVIVDASMPAMIRS
SGQMWNVAGTLQDTKAVIPDRCYAGVYKTVINDCKLHGAFDPMTMGSVPNVGLMAQKAEE
YGSHDKTFQVQSVGVVRVSDDRGEVLFEHSVEVGDLWRMCQTKDAPIQDWVRLAVERARL
SHVPAVFWLDSARAHDVQVIAKVERYLKDHDTNGLDIRIMSPVAAMEFSLARIRKGQDTI
SVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMAGGGLFETGAGGSAPKHVQQFTEENYL
RWDSLGEFLALAASLEQLGNRYDHVAAKVLAKALDVANGQILDNNKSPAREIGELDNRGS
HFYLALYWAQALAAQDEDVALQVKFASLAKVLSEHEVAIVADLNAVQGSPVDIGGYYHPD
LARVAAAMQPSKTFNDALRLFSS
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtacgcccaagcttatttatacacttacagacgaggcgccgttcttggcaacg
cagtcgctattgccaattatcaaggcttacaccaaggttgctggtatccaggttgagaca
cgtgatatttctttggccgggcgtatcttggcgcagtttcctgatgtgttgaccgagacg
caaagagtcagtgacgatctggctgagttgggggaaatgacggctagtccggatgccaac
attattaagttgcctaatatcagtgcttcaatgccgcagttaaaggctgctatcaaagag
ttgcaggagcagggctatttgttgccggattatccggatgaaccaaaaaatagtgcgcaa
aaggatgtcaagatgcgctatgacagggtgaagggtagtgcggtcaatcccgtactacgt
gaaggcaattctgatcgccgtgccccgttgtcagtgaagaattatgtgcgtaagtatccg
catcggatgggggcgtggagtactacatccaagtcgcatgtcgcacatatggatggcggt
gatttttttggtagtgaacgttcggctgtactcgctcaggctggtatgttgaaggtcgag
ctgattgctaaggatggcacggtgacggtactcaaggataaggttgcagtgagtgccggt
gatattgtggatgctgcggtgctgagtaagcaggcattggctgtgtttgttgctgcacag
atgaatgatgcgaagtcacagggggtgctgttttcggtacacctgaaggcgacgatgatg
aaggtgtccgatccggtgatatttggggtgtttgtttcagagttctacaaagaggctttg
gccaagcatgctgacacgttgaaacaggtcggttttgatcctaacaatggtattggcgat
ttgtacgcacgcattgttgcgttgccggaggagatgcaggcagtcatcagggctgatgtg
caggctcagtatgccaaacgtcctggtttggcgatggttaattcgggcaaggggatcact
aatttgcatgtgcctagtgatgtgattgtggatgcgtcgatgccggcgatgatccgtagt
tctgggcagatgtggaacgttgcaggcacgctccaagacactaaagcagtgattccggat
cgttgttatgccggcgtgtataaaactgtcattaatgattgcaagttacacggtgctttt
gatccaatgacgatgggttcggtgcccaatgtcggtttgatggcgcagaaggctgaggaa
tatggttcgcacgacaaaacgtttcaggtacagagtgtgggtgtagtccgtgtcagtgat
gatcggggtgaggtgttgttcgagcattcggtagaggtgggtgatctttggcgcatgtgt
caaacgaaggatgcaccgatccaggattgggtcaggttggcggtggaacgtgcccgtctg
agtcatgttccggcagtgttctggttggacagcgcccgtgcgcatgatgtgcaggtgatt
gcaaaagttgagcgttatttaaaagatcacgataccaacggtttggatatacgtattatg
tcgccggtggcagcgatggaattttcgctggcccgtattcgtaaaggtcaggacacgatt
tcggtgaccgggaatgtgttgcgggattatttgaccgatttattcccaatcatggaattg
ggcaccagtgccaagatgctttccattgttccgttaatggcgggaggtggtttgtttgaa
accggtgccggtggttccgcgccgaagcatgtacagcaatttactgaggagaattacttg
cgttgggattcgttgggtgagtttctggcgttggctgcatcgttggagcagcttggtaac
cgctatgatcatgttgctgcaaaggtgttagcgaaagcgctggacgtggctaacggtcaa
attttggataacaacaaatctcctgcgcgtgaaatcggtgagttggataatcgtggtagc
catttttatctcgctttgtattgggctcaggcattagctgcacaggatgaggatgttgcg
ttgcaggttaagtttgcatctttggctaaagtgctgagtgagcatgaggtagccatcgtt
gctgatctcaatgcggttcagggatctccagtggatattggtggttattatcatcctgat
ttggctagggttgctgctgcgatgcagcctagtaagaccttcaacgatgcgttgaggttg
ttctcgagttga
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