Xanthomonas fragariae: BER92_00970
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Entry
BER92_00970 CDS
T04667
Name
(GenBank) polymerase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
xfr
Xanthomonas fragariae
Pathway
xfr00540
Lipopolysaccharide biosynthesis
xfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
BER92_00970
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xfr01005
]
BER92_00970
Enzymes [BR:
xfr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
BER92_00970
Lipopolysaccharide biosynthesis proteins [BR:
xfr01005
]
Core region
BER92_00970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
AOD13566
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All DBs
Position
complement(215796..217007)
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AA seq
403 aa
AA seq
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MGIAELGVFALTALVVSMPSGLLPFGLCLLLGSLVGWRSLRVGIASCSWSLRALCWLTAA
VIAMSLLSIALFEHGLRDVDNRSRFLVLPWAALWAYALQPRQVWLWRGALTGVFAAMLIA
MLQVMNGADRAEGWTNAIVFADIALMLLVVAVFCRPVGNVRWLVGAAIATVMVIVLSGSR
GVWLSLLVTLGVLIWGAPWHSARMRLLTFVGSAVLGVGVVVSVPALTDQMRLGELQSDLQ
RYEVGDSDSSAGARIERLHVAWDTLRAHPLTGVGVGRFDDAMRELPVCADDTWLLRCHLG
HAHNDLAEWGATQGIPGVLLLIAVYGVPLWVFVCLHRRSGQRQFRGPAAAGVMIVMSYAL
CGLTQSMFAHQVSASFYTAMVGVLSGLAARQAQQAAAGAANKA
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
gtgggtatcgccgagctgggcgtgttcgcgttgaccgcactggtggtcagcatgccgagc
gggctgctgccattcggcctgtgcttgttgcttggctcgctggtcggttggcgcagcctg
cgcgtgggcatcgcctcgtgtagttggtcgttacgcgcactgtgctggctgacggcagcg
gtgatcgcgatgtcgctgctgtcgattgcgttgttcgaacacgggctgcgcgatgtcgac
aaccgctcgcgctttctggtgctgccatgggcggcgttgtgggcttacgcattgcagccg
cgccaagtctggctatggcgcggcgcgctgaccggtgtgttcgcggcgatgctgattgcc
atgctgcaggtgatgaacggtgccgaccgcgcggaaggttggaccaatgcgattgtgttt
gccgatatcgcgctgatgttgctggtggtggcggtgttctgtcgcccggtcggcaatgtg
cgttggttggtgggcgccgccatcgccacggtgatggtgatcgtgctcagcggcagccgc
ggtgtgtggctgtcgttgctggtgactttgggcgtgttgatctggggggcgccgtggcac
agcgcacgcatgcgcttgctgactttcgtcggcagcgcggtactgggagtgggcgtggtc
gtcagcgtgccggcgttgaccgatcagatgcgccttggcgagttgcaaagcgatttgcag
cgttacgaagtcggcgacagcgattcgtctgccggtgctcgtatcgaacgtttgcatgtg
gcgtgggacaccttgagagcgcatccgttgaccggcgtcggtgtcggccgtttcgatgat
gcgatgcgcgaactgccggtatgcgcagacgatacttggttgctgcgctgtcatcttggt
cacgcgcataacgatctggctgagtggggggcgacccagggcatccccggggtgctgctg
ctgatcgcggtctatggcgtgccgctgtgggtctttgtatgcctgcatcgacgcagcggg
cagcgtcagttccgtggcccggcagcggccggtgtgatgatcgtgatgagttacgcattg
tgcggattgacccagtcgatgttcgcgcaccaagtatcggcgagtttctacacggcgatg
gtgggtgtgctgtccggcttggcggcgcgccaggcgcagcaggccgcggctggcgcggct
aacaaggcctaa
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