Xanthomonas fragariae: BER92_08765
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Entry
BER92_08765 CDS
T04667
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
xfr
Xanthomonas fragariae
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xfr03016
]
BER92_08765
Enzymes [BR:
xfr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BER92_08765
Transfer RNA biogenesis [BR:
xfr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BER92_08765
Prokaryotic type
BER92_08765
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AOD16559
UniProt:
A0A1Y6H987
LinkDB
All DBs
Position
1927580..1928689
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AA seq
369 aa
AA seq
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MTDTSFLPRAHGAAVLSAAMRSAPEDFQVDELPAFEASGEGEHLLLTVRKRGQNTAYIAR
KLAQWAGIAEMGVSYAGLKDRHAMTTQRFSVHLPKRIAPDIATLNDAEMQVVDRTWHNRK
LQRGALHGNRFVLTLRQVKGEHAAIEQRLQAITVRGIPNWFGEQRFGRDGANVASALAMF
GYVQNADGTFAAAPVSKRRLRNDQRSMLLSAARSSLFNRVLSARVEQGSWDAALEGEVWM
LDGSRSVFGPEPWSEVLAERLARFDIHPSGPLWGAGELRSTDQAAAVEQGALANPQSEAL
RQGLEAAGLKHERRALRLRPQCMDYCWLDAQSLQIEFALPPGCYATAVLWELGEVSDAGR
FNANVRSEE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatacttccttcctgccacgcgcgcacggcgctgcggtactcagcgcggcaatg
cgcagcgcgccggaagactttcaagtcgacgagctgccggcattcgaggcgtcgggcgaa
ggcgagcacttactgttgaccgtgcgcaagcgtggccagaacactgcgtatatcgccagg
aaactcgctcagtgggccggcatcgcagagatgggtgtgagttatgcgggtttgaaggat
cgccatgcgatgaccacgcagcgttttagcgtgcatctgcccaagcgcattgcaccggac
atcgctacgctcaatgatgccgagatgcaggtggtcgaccgcacttggcacaaccgcaag
ctgcaacgcggtgcgctgcatggaaatcgtttcgtacttaccttgcgtcaggtgaagggc
gaacacgctgcgatcgaacaacggctgcaagcgatcaccgtgcgtggcattcccaactgg
ttcggcgaacaacgtttcggccgcgacggcgccaatgtagcttccgcgctggcgatgttc
ggctatgtgcagaatgccgatggaacgtttgctgcggcgccggtatcgaagcggcggcta
cggaacgatcaacggtcgatgttgctgtcggcagcgcgctcgtcgttattcaatcgcgtg
ctcagcgcacgtgtggagcagggcagttgggacgctgccctagagggtgaagtgtggatg
ctggatggctcacgtagcgtgttcggcccggagccgtggagtgaggtgctggcagagcgc
ctggcgcgcttcgatattcatcccagtggcccgttgtggggtgccggcgaactgcgttcg
accgatcaggctgcagcggtggagcagggtgccttggccaatccacaatccgaggcattg
cggcagggcctggaagcggctggactgaagcacgaacgccgcgcattgcgcttgcgtccg
caatgcatggactactgctggctcgacgcgcagagcttgcaaatcgaatttgcgctgccg
ccaggctgttacgccaccgcagtgttgtgggaattgggcgaggtcagcgacgcaggtcgc
ttcaacgccaacgtgcgctctgaagagtga
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