Xanthomonas fragariae: BER92_08910
Help
Entry
BER92_08910 CDS
T04667
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
xfr
Xanthomonas fragariae
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xfr03009
]
BER92_08910
Enzymes [BR:
xfr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
BER92_08910
Ribosome biogenesis [BR:
xfr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BER92_08910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AOD14839
UniProt:
A0A1Y6H9B8
LinkDB
All DBs
Position
complement(1953244..1954875)
Genome browser
AA seq
543 aa
AA seq
DB search
MSDTPRKLSLNKLSLKRDSAPEVPKLEERLHKVLAQAGLGSRRALEQRIADGLIKVNGAV
AQTGMSVRSGDKIELDGRSFVASALTEPSRVLIYNKPEGEVTTREDPEGRPTVFESLPAL
KGSRWIAIGRLDINTTGLLLLTTDGELANAMMHPSYEVEREYVVRVRAPENEEKVSDAII
ERLSRGVLLEDGGAKFDQIERIGGTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRS
RYGKISLPRELLRGKSVEVPQEKVDALRAELKLEEGAPSALTLQPVIGQRRAAKSTVHVS
REGRSNAYVNGQTSGADEGRELRRFDNPREERGGRGRGKPGGYNGGLTVSGEAAARQSQQ
RPFKQRAPGKGDRALPDGNPAAFRSWYVPDGVSTGPSGHRNAGPSGPGTGQARPYAKKGP
GASGQGNPRPGAGGPGRGGAGGGQGQSQGQGQGQRKHPYGHPGNAPSFPSDHANPGFSPY
GTARPADGRPTGARPGGPGGNRGPGDNRCPGGPGGAPRGPGGPGSRPPGGNRRPPGGGGN
RGR
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccccccgcaagctgtcgttgaacaagctttccctcaagcgcgacagcgcg
cccgaagtaccgaagctggaagagcgcctgcacaaggtgctggcccaggccggcctgggt
tcgcgtcgcgcgctggaacagcgcattgccgatggcctgatcaaggtcaatggcgccgtt
gcgcagaccggcatgtcggtgcgcagcggcgacaagatcgagctggacggccgcagtttc
gtagccagcgcgctgaccgaaccttcgcgcgtgctgatctacaacaagcccgaaggcgaa
gtgaccacgcgcgaagaccccgaaggccgcccaaccgtgttcgagtcgctgccggcactg
aaaggctcgcgctggatcgcgatcggtcgcctggacatcaacaccaccggcctgttgctg
ctgaccaccgacggcgagttggccaacgcaatgatgcatccctcctacgaggtcgagcgc
gaatacgtggtacgcgtgcgcgccccggaaaacgaagaaaaagtctccgacgccatcatc
gagcgcctgtcgcgcggcgtactgctggaagacggcggcgccaagttcgaccagatcgaa
cgcatcggcggcaccgactcgcacgactggttccgggtggtggtcaaggaaggccgcaac
cgcgaagtgcgccgcttgtgggagtcacaaggctgccaggtcagtcgcctcaagcgcagc
cgctacggcaagatctcgctgccgcgcgaactgctgcgtggcaaatcggtcgaagtgccg
caggaaaaggtcgacgcgctacgcgccgaactcaagctggaagaaggcgcgccgtcggca
ctgacgctacagccggtgatcggccagcgtcgcgcggccaagtccaccgtgcatgtctca
cgcgagggccgcagtaacgcttatgtcaacggccagacctccggcgccgatgaaggccgc
gagctgcgccgtttcgacaacccgcgcgaagagcgcggcggccgtggtcgcggtaagccc
ggcggttacaacggtggcctcaccgtcagcggcgaagccgccgcccgacagtcgcagcag
cggccgttcaagcagcgcgcgcccggcaagggcgaccgcgcgctgccagatggcaacccg
gccgcgttccgtagctggtatgtgcctgatggcgtgagtaccggcccaagtggccaccgc
aatgccggccccagcggcccgggcactggccaggcacgcccgtatgcgaagaagggtcca
ggcgccagcggtcagggcaacccacgtcccggtgcgggcggcccaggtcgtggcggcgcc
ggtggcggccagggtcagtcgcagggtcaaggccagggtcagcgcaagcacccctatggt
cacccgggcaatgcaccgagcttcccgtccgatcatgccaatccgggattcagcccgtac
ggtacggcacgcccggcggacggtcgtccgaccggtgcgcgtcctggcggccctggtggc
aaccgtggccctggcgataatcgctgtcccggcggtccgggtggtgcaccccgcggtcca
ggtggcccgggtagccgtccgccaggcggaaaccgtcgaccgcccggtggcggtggcaat
cgcgggcgctaa
DBGET
integrated database retrieval system