Xanthomonas fragariae: BER92_11730
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Entry
BER92_11730 CDS
T04667
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
xfr
Xanthomonas fragariae
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xfr03019
]
BER92_11730
03009 Ribosome biogenesis [BR:
xfr03009
]
BER92_11730
Messenger RNA biogenesis [BR:
xfr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BER92_11730
Ribosome biogenesis [BR:
xfr03009
]
Eukaryotic type
Pre-60S particles
RNases
BER92_11730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AOD16606
UniProt:
A0A1Y6H8K6
LinkDB
All DBs
Position
complement(2588309..2588893)
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AA seq
194 aa
AA seq
DB search
MADTFTGNDRLIWIDLEMTGLDTDRDSIIEIATIVTDAQLNVLAEGPELAIAHPLATLEA
MDEWNRNQHRRSGLWQRVLDSRVTHAQAEAQTVTFLGEWIRAGASPMCGNSICQDRRFLH
RQMSRLERYFHYRNLDVSTLKELARRWAPTVANGFAKSSAHTALSDVRDSIDELRHYRQF
MGALGGDTQADVHS
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggcagacacctttacaggcaacgaccgactgatctggatcgatctggaaatgactggt
ctggataccgatcgcgattccatcatcgagatcgccaccatcgtgaccgatgcgcagttg
aacgtgcttgccgagggaccggaactggccatcgcccacccgctggcaacgctggaagcg
atggacgaatggaatcgcaatcagcatcgccgttcgggtctgtggcagcgcgtgctcgac
agtcgggtcacccacgctcaagccgaggcgcagacggtcacgttcctgggcgagtggatc
cgcgccggcgcctcgccaatgtgcggcaactcgatctgccaggaccgccgctttctacac
cgccagatgtcgcgcctggagcgctacttccactaccgcaacctggacgtttccaccctc
aaagagttggcgcgacgctgggcgccgacggtggccaacggtttcgccaaaagttcggca
cacactgcgctgagcgatgtgcgcgattcgatcgacgagctgcgccactaccggcagttc
atgggtgcgctgggtggcgatacgcaggctgacgtgcacagctga
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