Xylella fastidiosa Temecula1: PD_1325
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Entry
PD_1325 CDS
T00113
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
xft
Xylella fastidiosa Temecula1
Pathway
xft03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PD_1325 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xft03400
]
PD_1325 (uvrC)
DNA repair and recombination proteins [BR:
xft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PD_1325 (uvrC)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AAO29173
UniProt:
Q87BX2
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Position
1553486..1555351
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AA seq
621 aa
AA seq
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MTDNAPITFDGKRFAAHLSTAPGVYRMYAADDTLLYVGKAGALRKRVASYFNGTPKNTRL
TAMLAQVVRMDVTITRNEAEALLLENQLIKSLTPRYNVLLRDDKSYPYVLLTREAWPRIA
LHRGPQIVPGRYFGPYPGMTAVRDMLNLIHKLFKLRSCEDSVFRNRSRPCLQYQIGRCSA
PCVNVVTHDNYTEAVHRVTLFLEGKSDLLAEELIQAMQVASEHLEFEQAARLRDLLTSLR
SMQNRQYVDGRAADLDVLACAALSGHACVLLLSFRDGRNLGTRMFFPKTNGEERTAEILS
AFVSQYYAEYPPPPEILLDQEIPDHTLLEAAFSRSSAHKISLRWNVRGERAGYVELAVRN
AQVALSTELTSQRAQRVRSEAVRQLLGLEGPIKRVECFDISHTMGEATVASCVVFDAVGP
VRSQYRRYNITGITPGDDYAAMRQAIERRFRRAVEEDKQGERPDVLFIDGGAGQLAQAKM
ALNAVGVESVLLVGVSKGEERRAGHETLIMLDGQELHPGAASPALQFIQQVRDEAHRFAI
TGHRARRQKTRMTSKLEDIPGIGSRRRANLLKHFGGLAGVKAAGQTEIARVEGISTALAA
KIYASLHGLSKNDAANASRVS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgacggataacgcaccaatcacatttgatggaaaaaggttcgccgcacatctgagtacg
gcgcctggcgtctatcgtatgtacgctgctgacgacacgttgttatacgttggcaaagca
ggggcgctgcgcaaacgcgttgccagctatttcaatggcactccaaaaaatacccggctg
accgccatgctcgcccaggtggtacgcatggacgtcaccatcacgcgcaacgaagccgaa
gccctgctgctggagaaccagctcattaaatcactgactccgcgctataacgtcttgctg
cgagacgacaagagttatccatacgtactgctgacacgtgaggcatggccacgcattgca
ctacatcgcggcccacagatcgttccaggccgctacttcggcccctatcctgggatgacc
gcggtacgcgacatgctgaatctcatacacaaactattcaaactacgcagttgtgaagac
agtgtgttccgcaaccgttcgcgaccatgcctgcaatatcaaattggacgttgcagtgca
ccatgtgtcaacgtggtcacacacgataattacactgaggcagtacaccgtgtgacgctg
tttcttgaagggaaaagcgatctgcttgcagaagagttgatacaagcaatgcaagttgcc
agtgaacatctggaattcgagcaggccgcgcggttgcgcgacctgctcacctcattacgc
agcatgcaaaatcggcaatacgtggacggacgcgccgcagatttagatgtgctggcctgc
gcggctctatccggtcacgcctgcgtactgctgctcagtttccgtgatggccgcaatctt
ggcacacgtatgttctttcccaagacaaatggtgaagaacgcaccgctgagatactcagt
gcctttgtctctcaatactacgcggagtacccacctccaccggagatcctgctggaccaa
gaaatccccgatcacacactcctggaagccgcattcagtcgttccagcgcacataaaatc
agcctacgctggaacgtccgtggtgagcgtgccggttacgtcgagttagccgtacgtaac
gctcaagtagccttatccaccgaactcaccagccaacgtgcccagcgggtacgtagtgaa
gcagtacgtcaactgctcggtctggaggggccgattaagcgtgtagaatgcttcgacatt
agtcacacgatgggtgaggccacggttgcctcctgtgtggtgtttgatgctgttggtccg
gtacgttcccagtatcggcgttacaacatcactggcattacccctggtgacgactatgca
gcaatgcgtcaggccatcgagaggcgcttccgccgtgcggttgaagaagacaaacaggga
gaacgaccggacgtgctattcattgacggtggtgctggccagttggcacaagccaagatg
gcactcaacgctgttggggtggaaagcgtgctgctggtcggcgtgtccaagggcgaagag
cgccgtgcaggacacgagacgctgattatgctggatggacaggagctgcatcctggagca
gcttcacccgcgttgcagttcatccagcaggtgcgtgacgaggcacaccgatttgcaatc
actggacaccgcgcacgtcggcaaaaaacgcggatgaccagtaaattagaagacattcct
ggaatcggctcacgccgccgcgccaatcttctcaagcattttggtggactggcgggagtc
aaagctgctggccaaaccgagattgccagggtggaaggcatcagtactgcgctggcagcc
aagatttacgccagcctgcatggactatcgaaaaatgatgcagcaaatgcgtcgagggtg
tcatga
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