Xanthomonas citri pv. fuscans: XFF4834R_chr12580
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Entry
XFF4834R_chr12580 CDS
T03094
Symbol
garD
Name
(GenBank) probable D-galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu00053
Ascorbate and aldarate metabolism
xfu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
XFF4834R_chr12580 (garD)
Enzymes [BR:
xfu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
XFF4834R_chr12580 (garD)
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GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Motif
Other DBs
NCBI-ProteinID:
CDF60854
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Position
1425324..1426865
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AA seq
513 aa
AA seq
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MSATQQPTHWLSIRAHARDNVAIVVNDDGAPAGAIFPDGLTAIEHIPQGHKMALVDLPAG
AAVIRLGAVIGTANAAIARGAWVSEPLLDMPEAPELATLDLSLHPAQESEPLEGYTFQGY
RNRDGSVGTRNILGIMTSVQCVVGVLGHAVERIRAELLPRYPNVDDVVAVNHVYGCGVAI
TAPEAIIPIRTLRNIARSPNFGGQALIVGLGCEKLAPERLLPDDAGADDSAVYRLQEASL
GFADMVGSIMAMAEERLRHLDLRRRETVPASELVVGMQCGGSDAFSGVTANPGLGVAADL
LVRAGATVMFSENTEVRDGIHLLVPRAANADVAKALLREMAWYDTYLARGQADRSANTTP
GNKKGGLANIVEKAMGSIAKSGSSVINGVVPPGERVKGRGLQYCATPASDFVCGTLQVAA
GMNLHVFTTGRGTPYGLGMVPVIKVATRSELAQRWSDLMDIDAGGVATGAKTLEELGWEL
FQRYLDVASGQRTWTEQHRLHNDLALFNPAPIT
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaacccagcaacccacccattggctcagcatccgtgcccatgcccgcgacaac
gtcgccatcgtcgtcaatgatgatggtgcgccagccggtgccatcttcccggacggtctg
accgccatcgagcacattccgcagggccacaagatggccctggtggatctgcccgcaggc
gcggcggtgatccgcctgggcgcggtcattggcacggccaatgccgcgatcgcgcgcggc
gcctgggtgagcgagccgctgctggacatgcccgaggcgcccgagctggccacgctggac
ctgtcgctgcatccggcgcaggaatccgaaccgctggagggctacaccttccagggctac
cgcaatcgcgacgggagtgtgggcacgcgcaacatcctgggcatcatgaccagcgtgcag
tgcgtggtcggcgtgctcgggcatgcggtggaacgcatccgggccgagttgctgcccagg
tatcccaatgtcgatgacgtggtggcggtcaatcatgtctacggttgcggcgtggcgatc
accgcgccggaggcgatcattcccatccgcacgctgcgcaatatcgcgcgtagccccaac
ttcggcggacaggcgttgatcgtcggcctgggctgcgaaaagctcgcaccggaacgcttg
ctccccgacgacgccggtgccgacgacagcgctgtctaccgtctgcaggaagccagcctg
ggctttgccgacatggtcggctcgatcatggccatggccgaagagcggctgcgccatctg
gacctgcgccgccgcgaaaccgtcccggccagcgaactggtggtgggcatgcaatgcggc
ggcagcgatgcgttttccggcgtcaccgccaacccgggcctgggtgtggccgccgacctg
ctggtgcgtgccggggccacggtgatgttctccgaaaacaccgaagtgcgcgacggcatc
catctgctggtgccacgcgcggccaacgccgacgtggccaaggcgctgctgcgcgaaatg
gcctggtacgacacctatctggcacgcgggcaggccgaccgcagtgccaacaccacgccg
ggcaacaagaagggcgggctggccaatatcgtggagaaggcgatgggctcgatcgccaag
tccggttcctcggtcatcaatggcgtggtgccgcccggcgagcgggtcaaaggccgtgga
ttgcagtactgcgccaccccggccagcgatttcgtctgcggcacgctacaggtggctgcc
ggcatgaacctgcatgtgttcaccaccgggcgcggcactccctatggcctgggcatggtg
ccggtgatcaaggtcgccacccgcagcgaactggcgcaacgctggtccgacctgatggac
atcgatgccggcggcgtggccaccggcgccaagacgctggaagaactgggttgggagttg
ttccagcgctatctggatgtggccagcggccagcgcacctggactgagcagcatcgcctg
cacaacgacctggcgttgttcaatccggcgccgattacctga
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