Xanthomonas citri pv. fuscans: XFF4834R_chr26570
Help
Entry
XFF4834R_chr26570 CDS
T03094
Symbol
uvrB
Name
(GenBank) probable UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XFF4834R_chr26570 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xfu03400
]
XFF4834R_chr26570 (uvrB)
DNA repair and recombination proteins [BR:
xfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XFF4834R_chr26570 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
XFF4834R_chr26570 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
Cytokin_check_N
Motif
Other DBs
NCBI-ProteinID:
CDF62146
LinkDB
All DBs
Position
complement(3067975..3069996)
Genome browser
AA seq
673 aa
AA seq
DB search
MTDRFQLVSPYSPAGDQPAAIDKLVANFEAGLAKQTLLGVTGSGKTYTIANVVQQVQKPT
LVMAPNKTLAAQLYGEFKSFFPHNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIE
QMRLSATKTLLSRRDSLVVATVSAIYGLGAPEDYLSLRLILSVGEHIDQRQLIRHLTDLQ
YTRNEFELTRGAFRVRGEVLDVFPAESDTEALRIELFDGDIEQLTLFDPLTGETLRKLQR
YTVYPKTHYATTRERTLSAVDTIKEELKERLEQLYSQNKLVEAQRLAQRTQFDLEMMAEV
GFCNGIENYSRHLTGKAPGEPPPTLFDYLPPDALLVIDESHVTIPQIGAMYKGDRSRKET
LVEFGFRLPSALDNRPLRFEEWEARSPRSIYVSATPGPYEVRESAGEVTELVVRPTGLID
PVVEIRPVGTQVDDLMSEVHERIKLGDRVLVTTLTKRMAENLTEYLGEHGIRVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIG
RAARNLRGKAILYADKMTRSMQAAIDETDRRREKQVEYNLEHGITPKSVERPIADIMEGA
RDDAAEKKSGKGRSKSRQVAEETPDYRAMKPAEIAGKLKSLEQKMYQHAKDLEFEAAAQI
RDQIQKLKAASLG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccgttttcagctcgtatccccttactcgccagcgggcgaccagcctgcagcc
atcgacaagctggtcgccaacttcgaggccgggctggccaaacagaccttgttgggtgta
acgggctcgggcaagacctacaccattgccaatgtggtccagcaggtgcagaagccgacg
ctggtgatggcgccgaacaagacgttggcggcgcagctgtacggcgagttcaagtccttc
ttcccgcataacgcggtcgagtacttcgtcagctactacgactactaccagccggaggct
tatgtgccgtcgtcggacaccttcatcgagaaggacagttcgatcaatgaacacatcgag
cagatgcgcttgtcggcgaccaagaccctgctgtctcggcgcgattcgctggtggtagcg
acggtgtcggcaatctatggccttggcgcgccggaggactacctatcgctgcgtctgatc
ctgtcggttggcgagcacatcgatcagcgccagttgatccgccatctcaccgatttgcag
tacacccgcaacgagttcgaactgacacgcggcgccttccgcgtgcgcggcgaggtgttg
gatgtgttcccggccgagtcggataccgaagccttgcgcatcgagttgttcgatggcgac
atcgaacaactgacgttgttcgatccgctcactggcgaaaccttgcgcaagttgcagcgc
tacaccgtgtacccgaaaacccattacgccacgacgcgtgagcgtaccttgagtgcggtg
gacaccatcaaggaagagctgaaagaacgcctggagcagctctactcgcagaacaagttg
gtcgaggcgcaacgcctggcccagcgtacgcaattcgatctggaaatgatggccgaagtg
ggtttttgcaacggtatcgagaactactcgcggcatctcaccggcaaggcgccgggcgag
ccgccgccgaccttgttcgactacctgccgccggacgcgctgctggtcatcgatgagtcg
catgtgaccattccgcagatcggcgcgatgtacaagggcgaccgttcgcgcaaggaaacg
ctggtggagttcggttttcgattgccgtccgccttggacaaccgccccttgcgtttcgaa
gagtgggaggcgcgttcgccgcgcagcatctacgtctcggcgacgccgggtccttatgag
gtacgcgagtctgccggcgaagtcacggagttggtggtgcgcccgaccgggttgatcgac
ccggtcgtggagatccgcccggtcggcacgcaggtcgacgacctgatgtccgaggtccac
gagcgcatcaagctcggcgaccgcgtattggtgaccacgttgaccaagcgcatggccgaa
aacctcaccgagtacctgggcgaacacgggattcgggtgcgctacctgcactcggatatc
gacaccgtcgagcgcgtggaaatcattcgcgacctgcgtctgggcaagttcgatgtgctc
gtgggcatcaatctgctgcgcgagggtttggacatgccggaagtctcgctggtggcgatc
ctggatgccgacaaggaaggcttcctgcggtcgaccggttcgctgatccagaccattggc
cgtgccgcacgcaatctgcgcggcaaggccatcctgtatgccgacaagatgacgcgctcg
atgcaggcggcgatcgacgagaccgatcgtcgccgcgagaagcaggtcgagtacaacctg
gaacatggcatcacaccgaaatccgtcgagcggccgattgccgacatcatggaaggcgcg
cgcgacgatgcggccgagaagaagtcgggcaagggccgttcgaaatcacgccaggttgcc
gaggagacgcccgattaccgtgccatgaagcctgcggaaatcgccggcaagctcaagagc
ctggagcagaagatgtatcagcacgcaaaggatctggagttcgaggccgcagcccagatt
cgcgaccagatccagaagttgaaagcggcaagtctgggctag
DBGET
integrated database retrieval system
