Xanthomonas hortorum pv. gardneri: BI317_20150
Help
Entry
BI317_20150 CDS
T04668
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
xga
Xanthomonas hortorum pv. gardneri
Pathway
xga00550
Peptidoglycan biosynthesis
xga01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BI317_20150
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xga01002
]
BI317_20150
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xga01011
]
BI317_20150
Enzymes [BR:
xga01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BI317_20150
Peptidases and inhibitors [BR:
xga01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
BI317_20150
Peptidoglycan biosynthesis and degradation proteins [BR:
xga01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
BI317_20150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
APP86118
LinkDB
All DBs
Position
complement(4427613..4428818)
Genome browser
AA seq
401 aa
AA seq
DB search
MKFRFAAAVVATFAFGLVCAQTPAPQPTPAVAAAPAAVPVPPAPAPAVSKSWILMDYATG
QVLAGENIHQQLAPASITKVMTSYVVAAEIKNGKVKRDDQVMMSERAWREGGAGTDGSYS
GFPVNQTARLEDMEKGMAIQSGNDAAIALAEHVAGSEEAFASLMNSYAAKIGMKDSYFVN
AHGLSAEGHHSTAYDLAMLGRAMVRDYPETYAYNKIKEFQVGTIKQNNRNLLLWRDPAVD
GIKTGHTSEAGYCLLSSAKRGDQRLVAVVMGDSSERQRADDSLALLNWGFRFFETHSLYA
PGKVVTKQKVWKGEQDEVQLGVAQPLLVSLQRGRYNDLKPSMEVAKNLQAPIKKGQQIGT
VKVSLDGKIIAQAPLVAINAVEEGGFFKRLWDAFWMWWESE
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaaattccgcttcgccgccgctgtcgtggccacgtttgccttcggcctggtctgcgcc
cagacacctgcgccgcagccgactcccgcagtggctgcggcgccggccgccgtgccggtt
ccgcctgcacccgcgccggccgtgtccaagtcctggatcctgatggattacgccaccggg
caagtgttggccggtgaaaacatccatcagcagctggcgccggccagcatcaccaaggtg
atgacctcctacgtggtcgctgccgagatcaagaacggcaaggtcaagcgcgacgaccag
gtcatgatgagcgagcgcgcctggcgcgagggcggcgccggcaccgacggcagctacagc
ggcttcccggtcaaccagaccgcgcggctggaagatatggaaaagggcatggcgatccag
tccggcaacgacgccgcgatcgccctggccgagcatgtcgccggcagcgaagaagccttc
gcctcgctgatgaacagctacgccgccaagatcggcatgaaggattcgtacttcgtcaac
gcgcacggtctgagcgccgaaggccatcactccaccgcctacgatctggccatgctgggc
cgcgcgatggtgcgcgattacccggagacctacgcctacaacaagatcaaggaattccag
gtcggcaccatcaagcagaacaaccgcaatctgctgttgtggcgcgacccggcggtggac
ggcatcaagaccggccacacctccgaagccggttattgcctgctgagctcggccaagcgc
ggcgatcagcgcctggtggcggtggtgatgggcgactcgtccgagcgccagcgtgccgac
gacagcctggcactgctcaactggggcttccgcttcttcgagacccacagcctgtacgcg
cccggcaaggtcgtgaccaagcagaaggtgtggaagggtgagcaggacgaagtgcagctg
ggcgtggcccagccgctgctggtcagcctgcaacgcggtcgctacaacgacctcaagccc
agcatggaagtggccaagaacctgcaggccccgatcaagaaggggcagcagatcggcacc
gtcaaggtcagtctggacggcaagatcatcgctcaggccccgctggtggcgatcaacgcc
gtcgaagaaggcgggttcttcaagcgcctctgggatgcgttctggatgtggtgggaatct
gaataa
DBGET
integrated database retrieval system
