KEGG   Xanthomonas hortorum pv. gardneri: BI317_24720
Entry
BI317_24720       CDS       T04668                                 
Name
(GenBank) type-IV secretion system protein TraC
  KO
K12063  conjugal transfer ATP-binding protein TraC
Organism
xga  Xanthomonas hortorum pv. gardneri
Brite
KEGG Orthology (KO) [BR:xga00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:xga02044]
    BI317_24720
Secretion system [BR:xga02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   BI317_24720
SSDB
Motif
Pfam: TraC_F_IV P-loop_TraG DUF5934 AAA_10 AAA_22 DUF87
Other DBs
NCBI-ProteinID: APP87269
LinkDB
Position
pICMP7383.1:complement(106234..108618)
AA seq 794 aa
MNAFDSDNDIFVISPDRLGFGFICNPLTGFSDVTQQSMNSLLNTALPTGSLMQFVLYASP
DLEGKLHQYMVLRQNQKDETLQGLARARVEYLRSLTGEPISKTHQAKLRNMQLYVTVQVP
HGKTPPNEAQLARLTEQMSSIKAGLKTAGFRPETMTAKSYKRVMETILNHSPQAAWRAMP
WSQYDEDKLLCDQLLDLDTCVDIERNKLHLGEFAQVRVMSVKHYPDDVYPGMAMKYVGDL
MRGTRALREATVITVNIIYPDPDDERAKLFAKNTWATKNADGPLSKYIPDYGKQKQSSDI
AVKAVNDGDRMIRAYVGAAVFAQDSDSLIQASSDLKNAFQEIGFSLQDDAFMVGPMFFQM
LPFAASADMEDALGRYKLMPTRHCVAMLPLVASWSGTGTPMLTLFGRDGQLMSFSPYDSD
GNYNFLICAQSGMGKSFLANALTTNFLSMGGRAWIIDKGFSYKQICEFLDGQYIEFDSNS
NVCMNPFSGVRSYEEEADILCGILTVMAAPGQGLSDFQLSGLKRTLKGCWDKSGTLTTVD
MIADLLIAEEDKRLNDIGHQLFSFTSAGEFGRYFNGVNNLRMDARMVVLELQQLSGRMHL
QRVVLLQLLNQIQQAMDGLPRDMPKLLLVDEAFALLASNETQKFIETFYRQIRKFGGSAG
ICTQSVNDLYVNAGAIAMVENSAHMLLLGQKKESIAQVKKESRLELGEVGFRLLATVHTV
PGDYSEILINNAFGIGIGRLVVSDVEKLMFSSKAQDVMAIKSYRDKGMNLMDAIYAVLRD
RGIHVKDAGQRLAS
NT seq 2385 nt   +upstreamnt  +downstreamnt
atgaatgccttcgacagcgacaacgatatcttcgtcatctcgccggacagactcggcttc
ggcttcatttgcaatccgttgaccggcttcagcgatgtgacgcagcagagcatgaattct
ctgttgaacaccgcacttccaactgggtctctcatgcagttcgtgctgtatgcgagtccc
gacctggaaggcaagctccaccaatacatggtgctccgtcagaatcagaaggacgagacc
ttgcaggggctggctcgcgcacgagtggaataccttcgctcactaacaggcgagccgatc
tcaaagacccaccaggccaagctgcggaacatgcagctttacgtgacggtgcaagttccg
catggcaagacgccaccgaacgaagcacagttagcccggttgaccgagcagatgtccagc
atcaaggccggcctgaagaccgcgggatttaggcccgagaccatgaccgccaagtcctac
aagcgcgtcatggaaacgatcctcaatcattcgccgcaggccgcctggagagccatgcct
tggtcgcaatacgacgaggacaagctcctatgcgatcagttgctcgacctcgacacgtgc
gtagacattgagcgcaacaagctacatctaggcgagttcgcccaggtccgcgtaatgagc
gtgaagcattacccggatgacgtctacccgggtatggcaatgaagtacgtcggtgacctc
atgcgtggaacccgcgcgttgcgcgaagccacggtgatcaccgtcaacataatctaccct
gatccagacgacgaacgggccaagctcttcgccaagaacacctgggcgaccaagaacgcc
gacggtccgctctcgaaatatatccccgactatggtaagcagaaacagtcctccgacatt
gcggtaaaagcggtcaacgacggcgacaggatgattcgtgcgtatgtgggagcagcagta
tttgctcaggacagcgacagcctcattcaagcgtccagcgacctgaaaaacgccttccaa
gagatcggcttttcgctgcaggacgacgcattcatggtcggcccgatgttcttccagatg
cttccgttcgcggcaagcgccgacatggaagatgcgcttggacgctacaagctgatgccg
acgcggcactgcgtggccatgctgccgctggttgccagctggtcgggcaccgggacaccg
atgctcaccttgttcggccgcgacggtcagttgatgtccttctccccgtatgactcggac
ggcaactacaacttcctgatctgcgcccagtccggcatgggaaaatctttcctcgctaac
gcgttgacgactaacttcctcagtatgggtggccgggcgtggatcatcgacaaaggcttc
tcttacaagcagatctgcgaattcctggacggccagtacatcgagtttgattcgaactcc
aacgtctgcatgaatccgttctcgggggtccgcagctacgaggaggaagcagacatcctg
tgcggaatcttgaccgttatggcagcccccggccagggtttgagtgacttccagctctcg
ggcttgaagcgaacactgaagggctgctgggataagagcggtacgttaaccacggttgac
atgatcgcggacctattgatcgccgaggaagacaagcgcctcaacgacattggtcaccag
ttgttctccttcacgtcggctggagaattcggtcgctacttcaatggcgtgaacaatttg
cggatggacgcccgcatggttgtgcttgagttgcagcagctttccggccgcatgcatttg
cagcgtgtggtcctcttacagttgctcaaccaaatccagcaggcgatggatggtttgccg
cgcgacatgccgaagctgctactggtggacgaagcgtttgcattgctggcttcgaacgag
acccagaagttcatcgagactttctaccgtcagatcagaaagttcggcggtagcgcgggc
atctgcacccagtcagttaacgacttgtacgtcaacgccggcgcaatcgcgatggtcgag
aattcggcccacatgttgctgcttggccagaaaaaggaatccatcgcgcaggtcaagaaa
gaaagccgtttggagctgggtgaggtgggcttccgtctactcgcgacggtccacacggtc
cccggtgactactcggaaatcttgatcaacaacgctttcggtatcggcattggccgccta
gtcgtctctgatgtggagaaattgatgttctcatcaaaggcgcaggacgtgatggcgatc
aagtcgtatcgagacaagggaatgaacctaatggacgccatctatgcggtactgcgggac
cgcggcatccacgtcaaggacgcgggccagcggctggcaagctaa

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