Xanthomonas hortorum: XJ27_09250
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Entry
XJ27_09250 CDS
T05082
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
xhr
Xanthomonas hortorum
Pathway
xhr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XJ27_09250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhr03400
]
XJ27_09250
DNA repair and recombination proteins [BR:
xhr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XJ27_09250
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
XJ27_09250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
nSTAND1
DnaJ_CXXCXGXG
AAA_16
AAA_29
DUF4350
Motif
Other DBs
NCBI-ProteinID:
ASW48479
LinkDB
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Position
complement(2160639..2163215)
Genome browser
AA seq
858 aa
AA seq
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MSNAISSSSGLVRVRGAREHNLKNVDVDIPRDALVVFTGVSGSGKSSLAFGTIFAEAQRR
YLDSISPYARRLIDQVGVPEVDSIEGLPPAVALQQARGAPSARSSVGSVTTISNSLRMLY
SRAGTYPPGQEIIYADGFSPNTPAGACPTCHGLGRIYDATEATMVLDRTLSIRDRAVAAW
PGAWHGQNQRDILTTLGHDVDVPWHTLPKKTRDWILYTDEQPAVPVYAGYSLDEVKRALR
RKEEPSYMGTFTSARRYVLHTFATTQSAQMKKRVAQYLISTQCPQCDGKRLRREALSVTF
AGLDIGELSRRPLDDVAELLRPAAEGDAGKRKRNNARTQADTHPEQAIAAQRIAADLRAR
IEVVQALGLGYLSLERSTPTLSPGELQRLRLATQIRSQLFGVVYVMDEPSAGLHPADAQA
LLGALDQLKAAGNSVFVVEHEVDVIRHADWIVDVGPAAGVHGGQVLYSGPPAGLEQVDAS
STRRYLFGTPPQVHSHARDATGWLQLRGITRNNVRALDVDLPLGVFTTVTGVSGSGKSSL
VSQALVELLAAHLGQTQAEEDEALDPLERGTQVPLGGAIVGGLDQVRRLVRVDQKLIGRT
PRSNLATYTGLFDPVRKLFAATPAARRRRYDPGQFSFNVAKGRCATCEGEGSVHVELLFM
PSVYAPCPTCHGARYNAKTLEIELRGHSIAQVLEMTVDQAATFFAEDASVLRPLQVLREV
GLGYLRLGQPATELSGGEAQRIKLATELQRAQRRDTVYVLDEPTTGLHPADVDTLMRQLQ
GLVAAGNTVIVVEHDMRVAASSDWVLDMGPGAGGAGGRVVVAGTPDVVARHRGSLTAPFL
GALICLMIDVAVGRQRAV
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgcaatctcgtcgtcctctggcctggtgcgtgtgcgcggtgcgcgcgagcac
aacctcaagaacgtggacgtggacatcccgcgcgatgcgctggtggtgttcaccggagtg
tccggctcgggcaagtcgtcgctggcgttcggcaccattttcgccgaggcgcaacgccgc
tatctggattccatttcgccatatgcgcggcgcctgatcgaccaggtcggcgtgccggaa
gtggattccatcgaaggcctgccgccggcagtggctttgcagcaggcgcgcggcgcaccg
agtgcgcgctcgtcggtgggcagcgtcaccaccatctccaattccttgcgcatgctgtat
tcgcgtgcgggcacgtatccgccagggcaggagatcatttatgccgatggtttttcgccg
aacacgccggccggtgcgtgccccacctgtcacgggttggggcgcatctacgatgccacc
gaagcgaccatggtgctggatcgcacactgagcatccgcgaccgtgcggtggccgcgtgg
cctggcgcctggcacgggcagaaccagcgcgacatcctcaccacgctgggccacgacgtc
gacgtgccgtggcacacgctgccgaagaaaacccgcgactggattctctacaccgacgaa
caaccggcggtgccggtgtatgccggctacagcctggacgaggtcaagcgcgcgctgcgc
cgcaaggaagaacccagttacatgggcaccttcaccagtgcgcggcgctatgtgctgcac
accttcgccaccacccagagcgcgcagatgaaaaagcgcgtggcgcagtatctgatcagc
acccagtgcccgcagtgcgatggcaagcggctacggcgcgaggcgttgtcggtgaccttt
gccgggttggatatcggcgagctgtcgcgcaggccactggatgacgtggccgagttgctg
cgcccggctgcggagggcgatgctggcaagcgcaagcgcaataacgcgcgcacgcaggcc
gacacgcatcccgagcaagcgatcgccgcgcaacgcatcgctgccgatctacgcgcgcgg
atcgaggtagtgcaggcactgggcctgggctatctcagcctggagcgcagcacgcccacg
ctgtcgccgggcgagctgcaacggctgcggctggccacgcagatccgctcgcaattgttc
ggcgtggtgtatgtcatggacgaaccctcggccggcctgcatccggccgatgcgcaggca
ttgctgggcgcgctggatcagctcaaggccgccggcaattcggtgttcgtggtggagcac
gaggtggacgtgatccgccatgcggactggatcgtggacgtgggccctgcggctggcgtg
catggcgggcaggtgctctacagcggcccgcctgcaggattggaacaggtggacgcttca
tccacgcggcgctatctgttcggcacgccgccgcaggtgcacagccatgcgcgcgatgcc
accgggtggctgcagctgcgcggcatcacccgcaacaatgtgcgcgcgttggatgtggac
ttgccgctgggcgtgttcaccaccgtcaccggtgtgtccggctcgggcaagtcgtcgttg
gtgagccaggcgctggtggaattgctggccgcccatcttgggcaaacgcaggcagaggaa
gacgaggcgctggatccgctggagcgtggcacgcaggtaccgttgggtggcgcgatcgtc
ggtgggctcgatcaggtgcgccggctggtgcgcgtggaccagaaactgatcggccgcaca
ccgcgttcgaatctggccacctataccggcctgttcgatccggtacgcaagctattcgcc
gccaccccggccgcgcgtcgccgacgttacgacccggggcagttttcgttcaatgtcgcc
aagggccgctgcgccacctgcgaaggcgaaggctcggtgcacgtggaattgctgttcatg
cccagcgtctacgcaccgtgccccacctgccatggcgcgcgctacaacgccaagaccctg
gagatcgaactgcgtggccacagcatcgcgcaggtgttggaaatgacggtggaccaagcc
gccacattctttgccgaagacgccagcgtgctgcgtccgttgcaggtgttgcgcgaagta
gggctgggctatctgcggctcggccagccggccactgaactctccggtggcgaggcgcag
cgcatcaagctggccaccgaactgcaacgcgcgcagcggcgcgacaccgtctatgtgctg
gacgagccgacaaccggcctgcatccggccgacgtggataccttgatgcgccagctgcaa
ggcctggtggcggcgggcaatacggtgatcgtggtcgaacacgatatgcgcgtggccgcc
agcagcgactgggtgctggacatggggccgggcgccggtggtgcgggcggccgtgttgtg
gtggcgggtacacctgatgtggttgcacggcatcgcggcagcctgactgctccctttctc
ggggcgctgatctgtttgatgatagatgtcgcagttggacgacaacgcgccgtctaa
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