Xanthomonas hortorum: XJ27_15295
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Entry
XJ27_15295 CDS
T05082
Name
(GenBank) pseudouridylate synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
xhr
Xanthomonas hortorum
Brite
KEGG Orthology (KO) [BR:
xhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xhr03009
]
XJ27_15295
03016 Transfer RNA biogenesis [BR:
xhr03016
]
XJ27_15295
Enzymes [BR:
xhr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
XJ27_15295
5.4.99.29 23S rRNA pseudouridine746 synthase
XJ27_15295
Ribosome biogenesis [BR:
xhr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
XJ27_15295
Transfer RNA biogenesis [BR:
xhr03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
XJ27_15295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ASW47176
LinkDB
All DBs
Position
complement(3501619..3502515)
Genome browser
AA seq
298 aa
AA seq
DB search
MVSTRPILDGIPASQFQLPMGAWATVLEALCACFPSVDAATWRDRFARGRVLDAQQQVLE
VSAPYRLGAEIYYFREVADEPVIAATETVVYADAYVVVACKPHFLPVVPAGIYVRETLLT
RLVRRFDNSALVPLHRIDRDTAGLVLFSANPSTRGIYQALFRERRIRKHYLAVAPPLPGL
TFPYVHRSRLEPGEPFFRMREGVGEPNSETVIDVVARGADTWTYRLEPVTGRKHQLRMHM
AALGAPILHDRFYPDLEDQRPDDPARPLQLFAHTLAFDDPITGEPRHFTATVGPMKQP
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaacacgcccgattcttgatggtattcccgccagccagttccagctcccgatg
ggagcctgggcgacggtgctggaggcgctatgcgcgtgtttcccgagtgtggatgccgcc
acgtggcgtgaccgcttcgcgcgtgggcgtgtgttggatgcgcagcaacaagtgttggag
gtttccgcgccctatcggctcggcgcggagatctactatttccgcgaggttgcggatgag
cccgtcatcgcggcgacggaaaccgtggtgtatgccgatgcgtacgtggtggtggcatgc
aagccacactttctgccagtagtgccagccggcatctatgtgcgcgagacactgctgacg
cggttggtgcgccgcttcgataattccgcgttggtgccgctgcaccgcatcgatcgcgac
actgcggggttggtgttgttctcggccaacccgtccacgcgcgggatctaccaggcgcta
ttccgcgagcgacgcatccgcaaacactatctggcggtcgcaccgccgctgccggggctg
acgtttccgtatgtgcatcgcagccggttggagccgggtgagcctttcttccgcatgcgc
gagggcgtgggagagccgaacagcgagactgtgatcgatgtagtcgcgcgtggtgcggac
acgtggacttaccggctggagccagtcaccgggcgcaagcaccagttgcgcatgcatatg
gccgcgctgggcgcgccgatcctgcatgaccgtttctatcccgatctggaagatcagcgg
cccgatgacccggcacggccgctgcagctgttcgcgcatacgctggcattcgatgatccg
atcaccggcgagccgagacacttcaccgcaactgtcgggccaatgaagcagccataa
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