Xanthomonas hortorum: XJ27_19905
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Entry
XJ27_19905 CDS
T05082
Name
(GenBank) peptidase C39
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
xhr
Xanthomonas hortorum
Pathway
xhr02010
ABC transporters
xhr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
xhr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
XJ27_19905
03070 Bacterial secretion system
XJ27_19905
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhr02000
]
XJ27_19905
02044 Secretion system [BR:
xhr02044
]
XJ27_19905
Transporters [BR:
xhr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
XJ27_19905
Secretion system [BR:
xhr02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
XJ27_19905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_16
ABC_membrane_3
AAA_21
SbcC_Walker_B
DUF87
Zeta_toxin
NB-ARC
GLTT
PRK
Motif
Other DBs
NCBI-ProteinID:
ASW47949
LinkDB
All DBs
Position
4615314..4617479
Genome browser
AA seq
721 aa
AA seq
DB search
MSGGSASLSLLEGGSSVQDRPDLGLQGLVLLAQFHGVAADAVQLAHGFGRGGEPFDETTL
LLAAKQLGLKAKVVAQPAARIGMAALPALALVPDGDAFIVAKVGADQILIHDLVEKRPRS
ISPAEFEARYQGRLLQVASRASVLGDLAKFDFSWFIPAVVKYRKLMIEVFVVSFFIQLFA
LITPLFYQVVMDKVLVHNGLTTLDVIAIGLVSMAVFDVLLSGLRTYVFAHTTSKIDVELG
ARLFRHVLSLPLAYFESRRVGDTIARVRELENIRNFLTGQALTSVLDLFFTVVFLSVMFW
YSGWLTLIVVLSLPLYATISGLITPVLRQRLNDKFARGADNQSFLVETVSGIGTVKAMAV
DPRVTRTWDNQLAGYVSAGFNVTRIATLGQQGVQLVQKLTAVAVLFWGAKLVMEGKLSIG
QLIAFNMLSGQVTAPIIRLAQLWQDFQQVGISVERLGDILNTRTEVPGSRLALPPIRGQV
TFERVTFRYRPDAPEVLNGIELDIRPGEIIGIVGRSGSGKSTLTKLVQRLYTPERGRVLI
DGQDLALADPAWLRRQLGVVLQENFLFNRSVRENIALTDPGMPLERVIHAAKLAGAHEFI
LELPEGYDTKVGEHGTGLSGGQRQRIAIARALIGDPRILILDEATSALDYESEHAVMSNM
RAICKGRTVLIIAHRLSTVRQANRIVVVEKGRIIESGSHAELVDRPEGQYAHLYRLQQGT
P
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggggaagtgcgtcgctctcgttgctcgagggcggctcgtcggtgcaagaccga
ccggatctggggctgcaggggctggtcctgctggcgcaatttcatggcgttgccgcggat
gcggtgcagctggcgcatgggtttggccgaggcggtgagccgttcgacgaaaccacgttg
ctgctggccgccaagcagctggggctgaaagccaaagtcgtggcccagccggctgcgcgg
atcggcatggccgcgttaccggccttggccctggtgccggatggcgacgccttcatcgtt
gccaaggtcggcgcggaccagatcctgatccacgatctggtcgaaaagcggccgcgctcc
atctcgcctgccgagttcgaagcgcgttaccaggggcgattgttgcaggtggcctcgcgg
gcttcggtgctgggcgacctggccaagttcgactttagctggttcattcctgcggtggtg
aagtaccgcaagttgatgatcgaggtcttcgtcgtctcgttcttcatccagctgttcgcg
ctgatcacgccactgttctatcaagtggtgatggacaaggtgctggtgcacaacggcctg
accacgctggacgtgatcgcgatcgggctggtctcgatggcggtgttcgacgtgttgctg
tccggactgcgcacctacgtgttcgcccacaccaccagcaagatcgacgtggagctgggt
gcgcggctgttccggcatgtgttgtcgctgccgttggcgtattttgaatcgcggcgggtc
ggcgacaccatcgcgcgcgtccgcgagctggagaatatccgcaacttcctgaccggacag
gcgctgacgtcggtgctagacctgttctttacggtggtctttctgtcggtgatgttctgg
tacagcggttggctgaccttgatcgtggtgctgtcgctgccgttgtacgccacgatttca
ggtttgatcaccccggtgttgcgccagcgtttgaacgacaagttcgcacgcggtgccgac
aaccaatccttcctggtggagacggtcagcggcatcggcacggtcaaggcgatggcggtg
gatccgcgtgtgacccgcacctgggataaccagctggccggctatgtcagtgccggtttc
aacgtcacccgcatcgcaacgctgggccagcagggcgtgcagttggtgcagaagctcact
gccgtcgcagtgctgttctggggcgccaagttagtgatggaaggcaagctgtcgatcggt
cagttgattgccttcaacatgttgtccggccaggtcaccgcgccgattattcgcttggct
caattgtggcaggacttccaacaggtcggtatttcggtcgagcgcttgggcgacattctc
aatactcgcaccgaggtgccgggcagccgcctggcactgccgccgattcgcgggcaggtg
acgttcgagcgggtcacgttccgctatcggccggatgcccccgaggtgctcaacgggata
gagctggacattcgcccaggcgaaataatcggcatcgtcggccgttccggctccggcaag
agcacgctgaccaagctggtgcagcggctctacacgcccgagcgtgggcgggtgctgatc
gatggccaggatctagcgctggccgatcctgcctggttgcgtcgtcagctgggcgtggtg
ctgcaggagaacttcctgttcaaccgcagcgtgcgcgagaacatcgcgttgaccgatccc
ggcatgccgctggagcgggtgatccatgccgccaagctggcaggcgcccacgaattcatt
ctggaactgcccgaaggttacgacaccaaggttggcgagcatggcaccggtttgtctggc
gggcagcgccagcgcattgcgatcgcgcgcgcgctgatcggcgatccgcgcatcctgatt
ctcgacgaagccaccagtgcgctcgactacgagtcggagcatgcagtgatgagcaatatg
cgcgcgatctgcaaggggcgcaccgtcctgatcatcgcgcatcgcctttccaccgtgcgg
caggcaaatcgcatcgtcgtggtggagaagggacgcatcatcgagagcggctcgcatgcc
gagctggtcgaccggccggaaggccagtacgcgcatctatacagactgcaacaggggaca
ccatga
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