Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00831
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Entry
AMD24_00831 CDS
T04108
Symbol
hemB
Name
(GenBank) Delta-aminolevulinic acid dehydratase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00860
Porphyrin metabolism
xii01100
Metabolic pathways
xii01110
Biosynthesis of secondary metabolites
xii01120
Microbial metabolism in diverse environments
xii01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
AMD24_00831 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xii04147
]
AMD24_00831 (hemB)
Enzymes [BR:
xii01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
AMD24_00831 (hemB)
Exosome [BR:
xii04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
AMD24_00831 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
ALJ56988
UniProt:
A0A0P0G8U0
LinkDB
All DBs
Position
complement(869498..870340)
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AA seq
280 aa
AA seq
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MPGIKKLSVKGLVQECGDLVQLGCLAVAIFPSVAWERKDARGSCSLDSDNILFTAVQAVK
KSFPGLMVIADVALDPYTDHGHDGIVDSKGHVDNDASVEALCKLAVAEAGIGVDIVAPSD
MMDGRVGAIRGALDNAGFQEVSILSYAVKYASAYYNPFRDAVGSGGNLSLLDKKSYQMDP
ANVREAIREALLDVQEGADMLMVKPAGPYLDIIRVVREQTLLPLAAYQTSGEYAQIHAAA
QLGWLNYKQTRDEALLAIRRAGADLILTYFAREIAETSSS
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccgggaataaaaaagctaagtgtgaaaggtttagtgcaagagtgcggggatttggtg
caactaggatgccttgcggtagcgatttttccttctgttgcatgggaacgcaaggacgct
cgtggctcatgtagccttgattccgacaacatcctttttactgccgtgcaagcggtgaag
aaatcctttccaggattaatggtaatcgccgacgtagctttagatccttatacagaccac
ggacatgacggaatagtagactctaaggggcatgtagataacgatgcaagtgtagaagct
ctttgtaaacttgcggtagcggaggctgggatcggggtagatatagtagcgccttctgat
atgatggatggacgggtgggggccatccgtggagcactggataatgcagggtttcaggaa
gtttccatcctcagctatgctgtcaagtatgctagcgcctactataatccttttagagat
gctgtggggagtggcgggaacctttccctgctggataaaaaaagttaccaaatggatccg
gctaatgtaagagaggccatccgtgaggctttactagatgttcaagaaggtgccgatatg
ctcatggtgaagccagcaggaccttacttggacataatccgcgttgtgcgtgaacagacc
cttctgcctttagctgcctatcaaacctctggagagtacgcacagatccatgctgcggca
caacttggttggcttaactacaagcagacgagggatgaagctctgcttgcaattcgtcga
gccggagcggatctaattttgacttactttgctcgcgagatagcggaaacatcatcatct
tag
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