Xenopus laevis (African clawed frog): 100158422
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Entry
100158422 CDS
T01010
Symbol
cop1.L
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X2
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04115
p53 signaling pathway
xla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100158422 (cop1.L)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
100158422 (cop1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
100158422 (cop1.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100158422 (cop1.L)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100158422 (cop1.L)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
100158422 (cop1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
WD40_like
zf-rbx1
zf_C2H2_10
zf-RING_10
zf-RING_11
zf-RING_4
Prok-RING_4
Sina_RING
zf-Nse
Motif
Other DBs
NCBI-GeneID:
100158422
NCBI-ProteinID:
XP_018113967
Xenbase:
XB-GENE-1014316
UniProt:
A0A8J0UX48
LinkDB
All DBs
Position
4L:complement(93963660..94057296)
Genome browser
AA seq
681 aa
AA seq
DB search
MSSSRQSQQLPGPGGGTGPSSSSAPSSSSSAGTLRPGLVSGSALSRLGTGGSGSALVGRP
GSSAGRKRPLPTPLSNGLINSYEDKSNDFVCPICFEMIEEAYMTKCGHSFCYKCIHQSLE
DNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFDDKRLKLDPSNGHRWQIFHDLLGAD
QDNLDLANVNLMLQLLVQKKRQLEAESHAAQLQILMEFLIVARRNKREQLEQIQKELSVL
EEDIKRVEEMSGLYSPQSEDSTVPQFEAPSPSHSLIDSTEYSQSPGFSGSSQTKKQPWYN
STLASRRKRLTAHFEDLEQCYFSTRMARVSDDSRTASQLDEFQECLSKFTRYNSVRPLAT
LSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN
SKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLA
SGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQ
PIMVFKGHRKAVSYAKFVNGDEIVSASTDSQLKLWNVSRPHCLRSFKGHINEKNFVGLAS
NGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPD
GESNVLIAANSQGTIKVLELV
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaagtcggcaatctcagcaactccccgggcccggaggtggaacgggcccctct
tcgtcatcagccccgtcttcttcttcttcagcgggtacattgcggcctggactagtcagt
ggctccgctctcagccgactcggaactggaggcagtggatccgcgttagtgggaaggccg
gggagctcagctggtaggaagaggcctttgcctacacctctgtctaatggcctcattaac
tcctacgaggacaagagtaacgatttcgtgtgcccaatatgctttgaaatgattgaggaa
gcatacatgactaaatgtggacacagtttctgctataagtgtatccatcaaagcctggag
gacaataaccgctgtccaaagtgtaactatgtggtagacaatatagatcatctctatcct
aactttttagtaaatgagttaatcctcaaacagaagcaaagatttgatgataagcgtctg
aagctggatccatcgaatgggcacaggtggcagatattccacgatttactaggggcagac
caagataatctggatttggccaatgtaaatctaatgctgcagctgcttgtccagaaaaaa
aggcaattggaggctgaatcccatgctgctcagctgcagatccttatggaatttctcatt
gtagctcgccgaaataaaagagagcaactggagcaaattcaaaaggagctaagtgtactg
gaagaggacataaagcgcgtggaggaaatgagtggcttgtattcccctcagagtgaagat
agtactgtgccacaatttgaagctccttctccttcccacagcctgattgactcaacagaa
tacagtcaatctccaggattcagtggcagctcccagacaaagaagcaaccatggtacaac
agcaccctggcatcacgaagaaaacgtcttacagcccattttgaggacttggagcagtgc
tacttttcaacaaggatggcacgtgtatcagatgacagtcgaacagcaagtcagttagat
gaatttcaagaatgcctttccaagttcaccagatacaattctgtgcgacctctagcaacc
ctatcttatgccagcgatctctacaatggctctagcattgtgtccagcatagagtttgac
cgagactgtgactactttgccattgctggtgtgacaaagaagataaaggtatacgagtat
ggcactgttattcaggatgctgtggatatacactaccctgagaatgaaatgacctgtaat
tccaaaattagctgtataagttggagcagctatcacaagaacctcctggctagcagtgat
tatgaaggcactgtcatcttatgggatgggttcacagggcaaagatccaaggtgtatcag
gaacatgagaaaaggtgttggagtgttgattttaatcttatggatcccaaactcctggcc
tccggttcagatgatgccaaagtaaagctgtggtccacaaacttggataactctgttgca
agtattgaagccaaagcaaatgtatgctgtgttaagttcagcccctcctctcgctaccat
ctagccttcggttgtgcagatcactgtgtccactattatgaccttcggaacactaagcag
cccattatggtgttcaaagggcatcgcaaagcagtctcctatgccaaatttgtaaatggg
gatgagatagtctcagcgtcaacggatagtcagttgaaattgtggaatgtgtcaaggcca
cattgtcttcgttcgtttaagggacatattaatgaaaagaattttgttggcttggcatct
aatggagactacattgcttgtggaagtgaaaacaactccctctacctttattataagggt
ctttccaaaaccttgttgactttcaaatttgacacagtcaagagtgttttagacaaggat
aggaaagaagatgacaccaatgaatttgtaagcgccgtgtgctggcgtgcactccctgat
ggggagtcaaatgtacttattgctgctaacagtcagggcacaatcaaggtactggaactg
gtatga
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