Xenopus laevis (African clawed frog): 108700535
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Entry
108700535 CDS
T01010
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108700535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108700535
03036 Chromosome and associated proteins [BR:
xla03036
]
108700535
Transcription factors [BR:
xla03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
108700535
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108700535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
108700535
NCBI-ProteinID:
XP_041430612
UniProt:
A0A8J1LM63
LinkDB
All DBs
Position
8S:complement(52814151..52990142)
Genome browser
AA seq
2366 aa
AA seq
DB search
MTAESKSESKLNTLVQKLHEFLAHSSEESEDTPRQSISRRAAKVKSVNRLHPMENNMDEG
STSEKFNSLGSSRSKRKPSFVQKYVGSDEEMVPDKAVNIDGSNENSENEVNMESLPIGTV
VVQPEPVLNEDKDDFKGPEFRIRNKPKPGTPLPKKRTEDGLHGIVNCTACGQQVNHFQKD
SIYRHPALKVLICKTCYKYYMSDEINRDADGMDEQCRWCAEGGNLICCDYCHNAFCKKCI
QRNLGRKELSAIMDEDSKWECYVCRPEPLLDSVAACDSVFENLEQLLQQNKKKMKVDNEK
NKSNEHSQNHSDKNNSSCNGQVKNIGDAHAGTLTYSYRALMVPKEMLKKAKRLIETTTSL
NASFVKFMKQGTENNEMNPDEKLRQLKAFKSVLSDLKKAHQALEETLMEEVSSVEEQKKS
KKSRETPDETTHAKEKKLSEEKHKAQKKIAAHEKRKPSDSDNKHRDPDMNAFYDTEQAEE
VRNKNGKSSDLTEEHIKKSEPLSPADITQVLTINTQDTDNNVNMEDTDENIEGESEKEAA
ESDKGKQKSQKKKHKSMLDKPREDSPGSSKKSIRLPMKECDSPLPEKTKEKIMGNRCTEA
LKSGKSCTPQKKNKNAEATFEPNSTEALDMDIVSVPSSVPEDIFDSLDLSIEQQNSLQDS
VTGTTVSTSVKFKEVRKELKPLVKKQLVVQLTPVSLSSSPLKADNSNSCKSPKNGNGSDA
EMEAPNQNNTSCDEVLENTSENDLEECALRRSPRVKTTPRRRQTAANSATSNTEEESNDT
DKEKNGKMAACSKEKQISKAKHSPADSGESPKAKWSLAKKMKTQKNKSTSDSDDVPGVLK
NAALMSKSSSEFDSSNEANNGKKSSNHVEKATKGDGKRKRSTSSSGSELTKRTTRNSTAT
KKQRWDHSDTSNSELERELKKLCKKDAINKGSKQKFKKKEESIESSDEKHQSRSQKAKIS
KRERTPASNKKESSSDLSEEEQENSHNSDEDSDEQKIKPLVENEVVSATGFVQSSGDEAR
TICGAASAENDDDDDDDPENRYDSIHMDIKKIITHPKRGPKAEHRKSKQVVQTRTSCLVK
TRSQAARKFERVAIKTRPKNRKSMRKIAKKMLLEEIKANLSSDDTEEPFSDEEPEEGKKI
SGKENRSNPSDDDSSDSDSDSESKKIKYRHHLLSHKISLSDGKSGEERAKKDKAKNSKNG
KHRNRRKGAVTNQPLDSKKSSGVSEEISECDDSDDQRPRTRSFTEHIINDVVLIAEQHKD
MSITSKGWLWGVLIDVNDDCVLKAASGSKEEAACKMCDVTRVQHCSIHRAPLLLLDTRET
TFNAFRLQRKNPKRGQRSYKQKKKRRRIKVQDDASDSKVPTSKVGRIKRKLRYYTEIVPV
FKTFASPLRGRYFTGNKEWRDGIILQLQHCALSNHGSSENGDQDEDSDSKSPGKGRKKIR
KIIKNDKLRTETRNALKEEEERRKSIAEREQEREKLREVIDIGDASTVKCPVTTKLVFDE
DEETKEPLLQVHSTMVTKLKPHQVDGVQFMWDXESVKKTKKNSGSGCILAHCMGLGKTLK
VVTFLHTVLLSDKLDFSTALVVCPLNTVLNWLNEFEKWQDGMDDEENWRFALYVNHQVAE
LATVKRPQESSYMMQHWHQEGGILIIGYELYRNLTQGRNVKSKNVKEIFHKTLVDPRPDL
VICDEGHILKNEMSAISKAMNSIKTKRRIILTGTPLQNDLVEYHCMVNFIKENLLGSVKE
FRNRFINPIQNGQCADSTLVDVRVMKKRAHILYEMLAGCVQVCIFQKRGYFDEDSMEGFI
ASDSKESSMSLSSEEEVNKKKPKCKGKQENSSSEEESDYDVEVIKVWNSRSRGSKGKYND
EEALNSPVAPKVEQGNAASSFTPGSPAPDWYKDFLTEADASLMEHSGKVMLLFEILRMAE
VLGDKVLVFSQSLISLDLIEDFLELASTEKNEENTSDKPVFYKGDGKWFRNIDYYXDGQT
SPQTRKNWAEEFNDITNTRGRLFLISTKAGSLCINLVAANRVIIFDASWNPSYDIQSIFR
VYRFGQNKPVFVYRFLAQGTMEEKIYDMQVTKHSLSFRVVDQQQIERHFTMNELTEFYTF
EPDQLEDANSEKKKKRETPMLPKDTVLAELLQIMKEQKVTYHEHDSLLDHKEEEALTVVK
GFLCLFMLKSGFQTEHGFFCQFSEVSRNATIIAQVNINSQSPYMPLNLXSNQQLEDLIKQ
GREKVVEATNNIASARIQALEDIISTVWKENPTASVQSLALSRQSNQELEIKRREALYNN
VLTKQQMLISCVQRILMSRRLQEQYNQQQQQQHNVFHQQAAALSRLIQKNPNIIISPAAT
NFAQIDMRGMYQGGIQGHQMHVIHQL
NT seq
7101 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggagtccaagagtgaaagcaagttaaatacattggtgcagaagcttcatgaa
tttcttgctcactcatcagaagaatctgaggacacacctagacagtctattagcagacgt
gcagctaaagtcaagtctgtaaatcgactgcatccaatggaaaacaacatggatgaggga
agtacttctgaaaagtttaattccttgggatcatctcgttcaaaaaggaaaccgtcattt
gtgcaaaaatatgttgggtcagacgaagagatggtgccagataaagctgtcaatatagac
gggtctaatgagaattcagaaaatgaagtcaatatggaaagcttacccataggcacagtg
gttgtacaaccagaaccagtcttaaatgaagacaaagatgattttaaaggaccagagttt
cggatcagaaacaaacctaaaccaggtacacctttgcctaagaaacgcacagaggatggc
cttcatgggattgttaactgtacagcctgtggccaacaagtaaatcattttcagaaggat
tcaatttatcggcatcctgctttgaaagtgcttatatgtaagacatgctataaatattac
atgagtgatgaaataaaccgggatgcagatggaatggatgaacagtgcagatggtgtgct
gaaggaggaaacttgatttgttgtgattactgtcataatgccttttgtaagaagtgcatt
caacgaaatttgggcagaaaggagttgtctgctatcatggatgaagatagcaaatgggag
tgctatgtttgtcgaccagaacctttactggactctgtagctgcatgtgacagcgtgttc
gaaaatttagagcaattgttacagcaaaataagaagaaaatgaaagtggacaatgaaaaa
aacaaatcaaatgagcactcccaaaatcattcagataaaaataattcaagctgtaatgga
caggtcaaaaatataggtgatgcacatgctggtactttaacatattcttatagagcactt
atggtgccaaaggaaatgctcaaaaaggcaaaaagacttatagagacaacaactagcctg
aatgcaagttttgtaaagtttatgaaacagggaactgaaaataatgaaatgaaccctgat
gaaaagttacgacagttgaaggcatttaaatctgtcctgagtgacctaaagaaagcccat
caggctttggaggaaactttaatggaagaggttagttcagttgaggagcaaaagaaatct
aagaaaagcagagagaccccagatgagactacacatgcaaaggagaagaaacttagcgaa
gaaaagcacaaagcacaaaagaaaatagctgcacatgaaaaaagaaaaccttcagattct
gacaataagcatagagatcctgacatgaatgccttttacgatacagagcaggctgaagaa
gttaggaacaaaaatggcaaaagttcagatctcactgaggagcatataaagaaaagtgaa
ccattgtctcctgctgacattacccaggttttgacaataaatacacaggatacagataat
aatgtcaacatggaggacacagatgaaaatattgaaggggaaagtgaaaaagaggcagct
gagagtgataaaggtaagcaaaaatcacaaaaaaagaagcacaagagtatgctcgacaaa
cctagggaagactcacctgggagcagcaagaagagtattcgtttacctatgaaagaatgt
gattctcctctgcctgaaaaaaccaaagagaaaataatgggcaatcggtgcacagaggct
cttaaatctgggaaatcgtgcacaccacaaaaaaaaaacaaaaatgcagaggcaacattt
gaacccaattccactgaagctcttgacatggacattgtttcagttccatcttctgttcca
gaggatatattcgatagcttagatttatctatagagcagcaaaattctttgcaagattct
gtaacaggtacgacagtgagcacatctgtaaagttcaaggaagttcgaaaagaacttaag
ccactggtcaagaagcagttggttgtgcagctgacaccagtgtctctgtccagttctcct
ttgaaagcagacaacagtaattcatgcaaatctccaaagaatggaaatggtagtgatgct
gaaatggaggctccgaatcaaaacaacacttcatgtgatgaagtccttgagaacacctca
gagaatgacctagaggaatgtgctctcaggagatcacctcgtgtaaaaactacaccaagg
aggcgacaaactgctgcaaattctgcaacctcaaatacagaagaagagagcaatgataca
gacaaagagaaaaacggtaaaatggcagcatgttctaaagaaaaacaaatttctaaagca
aagcatagcccagcagacagtggggaaagcccaaaagcaaagtggtcattagccaagaag
atgaagacacaaaagaataaaagcacttctgattcagatgatgttccaggggtacttaaa
aatgcagcccttatgagtaaaagctcctcagaatttgatagcagtaatgaggcaaacaat
ggtaaaaagtcttctaatcatgtagaaaaagcaacaaaaggtgatggtaagaggaaaaga
agtacctcaagttctggttctgaactaaccaaaaggacaactagaaactcaacagctacc
aaaaagcaacgttgggaccattccgacacttcaaattctgagctagagagagaattaaaa
aaactttgtaaaaaagatgcaatcaacaagggctcaaagcagaaattcaagaaaaaggaa
gaaagcatcgaatcatctgatgaaaagcatcaaagtagatcacagaaagccaaaatatcc
aaaagagagagaacacctgcttctaataagaaggaatcctcatccgacctttctgaagag
gagcaagaaaatagccacaattcagatgaagacagtgatgaacaaaagatcaaacctttg
gtggaaaatgaagttgtatctgccacaggatttgttcaatcatcaggcgatgaagcacgt
acaatatgtggggcagcttctgctgagaatgatgatgatgacgatgatgaccctgagaat
aggtatgattccatccatatggacataaaaaagattataacacaccctaagcgtgggccc
aaagcagagcatcggaagagcaagcaggttgtacaaacccggacttcctgccttgtaaag
actcgatcccaggctgctcgcaagtttgaacgagtggccatcaaaacaaggccaaaaaac
cgaaagtcaatgagaaagattgccaagaaaatgcttctggaagaaatcaaagccaatcta
tcttcagatgatactgaagagccattctctgatgaagagccagaagaaggcaaaaaaatc
agtggcaaagaaaaccgaagcaatccaagtgatgatgacagttcagattcagactctgat
tctgaatctaaaaaaataaaatatagacaccaccttttgagtcacaagataagtttgagt
gatggaaagtctggagaagagagagcaaaaaaagataaagctaagaactcaaagaatggg
aagcatcgaaacagacggaaaggagcagtgacgaatcagcctcttgactccaaaaagtca
tctggggttagtgaggaaatttcagagtgtgatgattcagatgatcagcgacccagaaca
aggtctttcactgagcacatcattaatgacgtagtgctcattgctgagcagcacaaggac
atgagcatcacaagcaagggctggctgtggggcgtgttgatagacgtcaatgatgactgt
gtcctcaaggctgcctcgggcagcaaggaggaagctgcctgcaaaatgtgtgacgtcacc
agagtccaacattgcagtatccacagagcaccgttgcttcttctagacaccagggagaca
actttcaatgcattcaggctgcaaagaaagaatccgaaaaggggccagcgcagctacaag
cagaagaaaaagagaaggcgaattaaagtccaagatgacgccagtgatagcaaggtacct
acttccaaagtggggaggatcaaaagaaaactccgttattacactgaaatagttccagta
ttcaaaacttttgcatccccactgaggggaaggtatttcacgggaaataaagagtggagg
gatggcatcattctccaacttcagcactgtgctctgagtaatcatggtagttcagagaat
ggagaccaagatgaggactcagactccaaatcacctggaaagggcaggaagaagataaga
aagattatcaaaaatgacaagttgcgaacagaaactcggaatgccttgaaagaggaagag
gagagaaggaagagtatagcagagagagagcaagaacgagagaaactaagagaggtcatt
gatattggagatgcatcaactgtgaagtgtccagtcaccactaaactagtgtttgatgaa
gatgaagaaacaaaagagcctttgttgcaggttcacagtaccatggttacaaagctgaaa
ccacatcaggtagacggtgttcagttcatgtgggacntggagtctgtaaaaaagaccaaa
aagaactctggttctggctgtatattggctcattgtatgggtctcggcaagactttgaag
gttgtgactttcctacacactgttcttttgtctgacaagttggattttagcactgcactt
gtggtgtgtccattaaacactgttttgaattggctcaatgaatttgaaaagtggcaggat
ggcatggacgatgaagaaaactggaggtttgcactttatgtcaaccaccaggtcgctgaa
cttgctacagtgaagcgtcctcaggaaagctcttacatgatgcaacattggcatcaagag
ggaggaatcttaataattggctatgagctgtaccgaaacctcacccaagggaggaatgtg
aagagcaagaacgtgaaagagatttttcataagactcttgtggatccaagaccagactta
gttatatgtgatgaagggcacatcctcaaaaatgaaatgtcagccatttccaaggccatg
aactccataaagacaaaaagaaggataatacttacaggaaccccattgcaaaatgatctt
gtagagtatcactgcatggttaactttatcaaggaaaacctacttggttccgttaaggag
tttagaaatcgtttcatcaatcctatccagaacggacagtgtgctgactctaccctagtt
gatgtcagagtgatgaaaaagagagctcacatcttgtatgaaatgttagctggttgtgtt
caggtgtgtatatttcagaaaagaggttactttgatgaagacagcatggaagggttcata
gcctctgactctaaggaatcctctatgagtctaagttctgaggaagaagttaataaaaag
aaaccaaagtgtaaaggcaaacaggagaacagctcaagcgaagaagaaagtgactatgat
gttgaagttatcaaggtgtggaattccagatcccgtgggagcaaaggaaaatataatgat
gaagaggccttgaacagccctgtagctcctaaagttgaacaaggcaatgctgcatcctct
ttcacacctggaagcccagcccctgactggtacaaggattttcttactgaagcggatgca
tctctgatggagcattctgggaaagtaatgcttctgtttgagattttgcgcatggctgag
gttttgggtgacaaagttttagttttcagccagtctcttatatctctggatttgatagaa
gattttctggaattggcaagtacagagaaaaatgaagagaacacatctgataagccagta
ttttacaaaggggatggaaagtggtttagaaatattgattactacnncgatggccaaaca
tcccctcaaacacgtaaaaattgggctgaggagttcaatgatattaccaatacaaggggc
cgtttgttccttatttctacaaaagcgggttccctgtgtattaatctcgttgctgctaat
cgtgtgataatctttgatgcatcatggaatccatcatatgatattcagagtatcttcagg
gtgtatcgatttggacagaacaagcctgtgtttgtctacaggtttttggcccagggcacc
atggaagaaaagatctatgacatgcaggtcaccaaacattccctgtcatttagggttgtc
gatcaacaacaaatagaacgtcactttacaatgaatgaactgactgaattttacaccttt
gagcctgatcagctggaagacgctaattccgaaaagaagaaaaaacgagagactcccatg
ctgcctaaggacactgtgctggctgagctgctacaaatcatgaaggagcagaaagtgacc
tatcatgagcatgactctcttctggatcataaggaagaagaggcccttacagtagtcaaa
gggtttttatgtttatttatgttaaaaagtggtttccaaactgaacatgggtttttctgt
cagttttctgaagtgagcagaaatgcaacaattattgctcaagtgaatatcaactcacaa
tctccgtacatgccgttaaaccttnnatctaatcagcaacttgaggatctaataaaacaa
ggcagagagaaagtggttgaagctacaaataacattgcatctgcaaggattcaagccctg
gaagacatcatctcgacagtgtggaaggaaaatccaaccgcctctgttcaatcacttgcc
ctaagcaggcagtcaaaccaagaactggaaataaagagacgtgaggccctttataacaac
gtactgactaagcagcaaatgttgatcagctgtgtgcagcgaatactcatgagtcgcagg
ttacaggagcagtacaaccagcaacagcagcagcaacataatgtttttcatcagcaagca
gcagcgctgagtcgcctgatacagaaaaatccaaatattataatatcccctgctgctact
aactttgctcaaattgacatgagaggaatgtaccaaggtggaattcaaggtcatcagatg
cacgtaatacaccaactataa
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integrated database retrieval system
