KEGG   Xenopus laevis (African clawed frog): 108703026Help
Entry
108703026         CDS       T01010                                 

Gene name
hdac4.S
Definition
(RefSeq) histone deacetylase 4 S homeolog
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:xla00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    108703026 (hdac4.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xla03036]
    108703026 (hdac4.S)
Enzymes [BR:xla01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     108703026 (hdac4.S)
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     108703026 (hdac4.S)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl HDAC4_Gln
Motif
Other DBs
NCBI-GeneID: 108703026
NCBI-ProteinID: XP_018094400
Xenbase: XB-GENE-6486313
UniProt: A0A1L8EPF2
LinkDB All DBs
Position
9_10S
AA seq 1066 aa AA seqDB search
MSSHTHSDGISGLDQPVDLLTQTRAKHMPSPVDVSAALPLQVAPSALPMDLRLDPQYTIS
AQEPSGREQQLQQELLSLKQKQQIQRQLLIAEFQRQHEQLSRQHEAQLHEHIKQQQELLA
MKHQQELLEHQRKLEQHRQEQQMEKQQRDQKLLQLKNKEKGKESAVASTEVKMKLQEFVL
NKKKALAHRSLNHCMSSDPRLWKTQHSSLDQSPPPQGLVSASYHQAVLGMYDSKDDFPLR
KTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPGITTLKKRPLDVSDSACNSAPGSGPSS
PNNSSSNISSENGIAGPLGLQTEASLAHRLVNRENSITQLPLYTSPSLPNITLGLPASGS
TNGGSGQENECLSLPALQQRLSLFPAAHLTSYLGPEATNSHNQLLQHMVLLEQPGAQSSL
ISGLGTLPLHSQSLVSPDRVSPTMHKLRQHRPLGRTQSAPLPQNSHALQHLVIQQQHQQF
LEKHKQQFQQQQLHLNKMIPKVNEASRQHESHPEETEEELREHQALHEEPYTERLAEQKE
LSPGNVVHVKQEKEESDDEENTLDLERSKMQSDPDLLFRQQTLLLEQQRIHQLRNYQASL
EAAGLVVPFSGHRPLSRAQSSPASASFPMSVQEAPSKTRFTTGLVYDTLMLKHQCICGNT
NSHPEHAGRIQSIWSRLQETGLRSMCECIRGRKATLEELQTVHSEAHTILYGTNPLNRQK
LEGSLASLFVRLTCGGVGVDSDTIWNEVHSSGAARLAVGCVVELASKVVSGELKNGFAVV
RPPGHHAEESTPMGFCYFNSVAIAAKVLQQRLNVAKTLIVDWDVHHGNGTQQAFYSDPNV
LYISLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMP
IAAKFSPDVVLVSAGFDAVEGHPSPLGGYTVSAKCFGYLTKQLMEISGGRIVLALEGGHD
LTAICDASEACVSALLGNKLEPLPESVLQQRPNINAVKSMENVIQIQSEYWPCLHISSST
VSYSLIEAQKCENEEAETVTAMASLSVDVRQERRTEDEPMDEEPPL
NT seq 3201 nt NT seq  +upstreamnt  +downstreamnt
atgagctcccatactcattcagatggaatttctggtctggaccaaccagtggacctttta
acacagacccgtgccaaacacatgccaagccctgttgatgtgagtgctgcattgccgctg
caagtggcccccagcgctcttcccatggacctgcggctagatccccaatatacaatttct
gcacaggagcccagtgggagggagcaacagctgcagcaagagctcctgtccttgaagcaa
aagcagcagatccaaaggcagcttttgattgctgagtttcaaagacagcatgagcagctg
tctcgccagcatgaagctcagctccatgagcatataaagcagcaacaagagctcctagcc
atgaaacatcaacaggagcttctggaacaccagagaaagctggagcaacaccgacaagag
cagcagatggagaaacagcaacgagatcagaaactgttgcagttaaagaacaaggaaaag
ggaaaagaaagcgctgtggcaagcactgaggtaaaaatgaaattacaagagttcgtgttg
aataagaagaaagctttagcccacagaagcttaaatcattgcatgtccagtgaccctcgc
ctttggaaaactcagcatagctctcttgaccagagtcctccaccacagggtcttgtgtct
gcctcgtatcaccaagctgtccttggaatgtacgactctaaggatgacttccctttaaga
aaaacagcatctgagcctaatctgaagttgcgctcaagactgaagcagaaagttgcagag
aggaggagtagccctctactgaggaggaaagatggccctggcatcactactttgaaaaaa
cgtcctttagatgtgtctgattctgcatgtaacagtgctccaggctctggtcccagttct
cccaataatagttcaagcaacatcagttcagaaaacggaatagctggtcctttaggcctc
cagacagaggcttcactggctcacagacttgtgaacagagagaattcaataacacagctt
cctctatacacatcaccctctttacctaatattaccttaggactgcctgcaagtggttct
accaatggtggatcaggacaggagaatgaatgcctttctctgcctgctctacagcaacgc
ctttccctatttccagctgctcacctcacatcttaccttggacctgaagccacaaactct
cataatcaacttttacaacatatggtactactagaacagcctggtgcacagagttctttg
atatcaggtttggggaccctaccacttcactcccagtctcttgtgtcacctgaccgtgta
tcccccaccatgcacaaattacgtcagcatcgtcctttaggccgtactcagtctgctcca
ctcccacagaattcacatgctctgcaacacctagtcatccaacaacagcaccagcaattc
ctggaaaagcacaaacagcaattccaacagcagcagcttcacctaaacaagatgattcct
aaagtgaatgaagcctcacggcagcacgagagccaccctgaggagactgaggaggagtta
cgtgagcatcaggcactgcatgaagaaccttatacagagcgtttagctgaacaaaaggaa
ttaagccctggcaatgtggtgcatgtcaagcaggagaaagaggaaagtgatgatgaagaa
aatacactggatttggaaaggagtaaaatgcagtctgacccagatctgctgtttagacag
caaacattattactggagcaacaacgcattcatcaactgagaaactatcaggcttcctta
gaggctgcaggcttagttgttcctttcagtggtcatcggcctctctcaagagcacagtcc
tcacctgcctctgcatcctttcccatgtctgtacaggaggcccccagtaaaaccaggttc
accacaggccttgtgtatgatacattgatgttaaaacaccagtgcatctgtgggaacaca
aacagccatcctgagcatgctggaagaatacaaagcatttggtcaaggcttcaagaaaca
ggtttacgcagcatgtgtgagtgtattcgaggcagaaaggcaacactggaagaactacag
actgtgcattctgaggctcacactatcttatatggcaccaatcccttgaaccgtcagaag
cttgaaggttccttggcttctcttttcgttcgtctcacatgtggcggggttggggttgat
agtgacacgatttggaatgaagtgcactcttctggtgctgcccgtcttgcagttggttgt
gttgtagaattggcttcaaaggtggtttctggagagctcaagaatggctttgctgtggtt
cgtcctccaggtcaccatgcagaagaaagtacacctatgggtttctgttacttcaactct
gtagcaatagctgccaaggttctccagcaaagattaaatgtcgcgaagacgctgattgtg
gattgggatgttcaccatgggaatggtacccaacaggcattttacagtgacccaaatgtc
ctttatatatcactccatcgctatgatgatggtaacttttttccaggcagtggagctcca
gatgaggttggaacaggtgctggagttggtttcaatgtgaacatggcttttactggtggt
ctggaccctccaatgggagatgcagaatatctggcagctttcaggacagttgtgatgccc
atagctgctaagttttctccagatgtggttttggtgtctgctgggtttgatgcagtggaa
ggacacccatctccacttggtggttacacagtctcagccaagtgttttgggtacctgaca
aagcaacttatggaaatatctgggggtcgcattgttcttgctctcgagggaggccatgat
ttaacagctatttgtgatgcctctgaagcctgtgtgtctgccctgctgggaaataagctg
gagccacttcctgagtctgtattgcagcagagaccaaacatcaatgcagtcaagtcaatg
gaaaacgttattcagatccaaagtgaatactggccttgtttgcatataagttcctcaact
gtgtcctattcacttattgaagctcaaaagtgtgagaatgaggaggcagagactgtgaca
gcaatggcatccctgtcggtagatgttcgccaggaacgaaggacagaggatgagccaatg
gatgaagaacctcctctgtag

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