Xenopus laevis (African clawed frog): 108703120
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Entry
108703120 CDS
T01010
Symbol
tmc5.S
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xla02000
]
108703120 (tmc5.S)
03037 Cilium and associated proteins [BR:
xla03037
]
108703120 (tmc5.S)
Transporters [BR:
xla02000
]
Other transporters
Pores ion channels [TC:
1
]
108703120 (tmc5.S)
Cilium and associated proteins [BR:
xla03037
]
Other cilia and associated proteins
Stereociliary proteins
108703120 (tmc5.S)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
108703120
NCBI-ProteinID:
XP_018094608
Xenbase:
XB-GENE-17345679
UniProt:
A0A1L8EQB1
A0A974H1Z5
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All DBs
Position
9_10S:complement(90150136..90199310)
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AA seq
901 aa
AA seq
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MSRKNSDGFINAAYHDSETLQMDRGLFSTSFSRQKSSFYNPNPYNDDDIGYGEQPPEMRH
NKLFLPMNSVQQDPEYSQQIPRNVVPKNNPYGEGEHSNPAFEPDSNTVTSYNYNGTEGHP
YFGSGIDLAEDPSFRRRSSRKSTTVLQPRISDVDPSLEQQENEELVRKLADLPTADIAKE
LRKIPTSLKAKRDLRSKVFLLKQKSFKGAYQMDCCNGCLHHIRVLSRKSRQSIADILVSL
QLWHSTLKVIGSKFGTSILSYFIFLKWLLRFNIFSFIVNFSFITIPQFFDMNPNNLSFSG
LELLTGAGYFQDTVLYYGFYTNSTIRNNESLAPYNMQLAYIFTIGLYLAACFLILLFSMA
RSFRKNFINPASFSGNACKLLCSWDFSITHEKVVNLKRRNLSTQIKETLSEILQEKLKLT
VSQRIVRFLIHLAAWLVSSGIAAGCCAGVYYLCLNLQSLQNASANELTRQAATLLVPVVV
ALINMIIPLVYAMFFLVEKYKYPKHEIYVEIIRNVLLKISIIGILCYYWLHSVAESQSEC
WESFVGEDIYRLVVIDFIFALIGSFFGEFIRRIIGMHCCKKLGRPEFDIARNVLDLIYAQ
TLAWIGMFFSPLLPIIQIIKLFIIFYVKKVSLMMNCTPPRRAWRAAQMTTIFIFLLFFPS
FAGVLCMIGVTVWRRQPSQNCGPFRGLETPYQSISNWVSSLTIFDNSLWVVWIYENIVES
VLFFYILTLIVLIISYLYWQIIQGRKIMVKHLYQQIANEGKDKSFLLHELRKAQSLNEAP
GRPPYKAAQRQMQSSYRSQEMHTVNEHIPLEPRSESIGTSDVLGLAMRARQQAEMEESSS
ALNSRLSSNNDYPPDSTGLAWSSRKQQDSGREPFWNNDSRSEAIAMVMRERQLAERGPPT
G
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcaaaaacagtgatggttttattaatgcagcctatcatgactcagaaaccttg
caaatggacagagggctgtttagcacatcgttctcaagacagaagtcatcgttctacaac
cctaatccctacaatgatgatgacattggctatggggaacaaccacctgaaatgaggcat
aacaaattgtttttgccaatgaactcagtgcaacaagatcctgaatacagccagcaaatt
ccaagaaacgttgttccaaaaaacaatccctatggagaaggagaacatagtaatcctgcc
tttgaaccagattccaatacagttacatcctataattataatggtactgaaggacaccca
tactttggcagtgggattgacctagcagaagatccaagtttcagaagacggtccagtaga
aagagcacaactgtgcttcagccaaggatttcggatgttgatccctctcttgaacaacaa
gaaaatgaagagcttgttaggaagcttgcagacttgccgactgccgacatagccaaagaa
ctcagaaagattccaacctctttgaaagcaaaacgtgacctgaggagcaaagtcttcttg
ttgaaacagaagtcatttaaaggtgcctaccaaatggactgttgtaatggatgtcttcac
catataagagtgttgtcccggaaatccaggcagtcaatagcagatattttggtatcattg
caactttggcacagcacactcaaagtaatagggagcaagtttggaacaagtatcctctcc
tattttatattcctcaagtggctcctgaggtttaacatcttctcatttattgtgaacttc
agtttcataacaattccacagttctttgatatgaaccccaacaacttgtcattttctggc
ctggagctactaacaggagctggctattttcaggacactgttttgtactatggtttttac
accaattctacaatcagaaacaatgagagcctcgctccttacaacatgcagctcgcctat
atcttcactatcggactgtaccttgcagcctgcttccttatcttgctatttagcatggca
agatcattccgtaagaatttcattaatccagcctccttctcaggcaatgcctgtaagctt
ctctgcagttgggatttcagcataactcatgaaaaggttgtgaatctaaagagaaggaat
ctgagtacacaaataaaggaaactctttcagaaatattacaggagaaactgaagttaact
gtgagtcagaggattgtacgttttctaatccatttggcagcatggttggtctccagtggc
attgcagctggatgctgtgctggtgtatactatctctgcttgaaccttcaatcccttcag
aatgcaagtgctaatgaactgacaaggcaagcagcaacattactggttccagtggtagtt
gccctgatcaatatgatcattcctcttgtctacgccatgtttttccttgtagagaaatac
aagtacccaaagcatgaaatctacgtagagattataaggaatgttctcctgaagatttcc
atcattggcattctgtgttattactggttacattccgttgctgaatcccagtctgagtgc
tgggaatcatttgtgggagaagacatctatcggcttgtagtgatcgatttcatatttgcc
ctgattggttccttctttggagaatttataagaagaatcattgggatgcactgctgcaaa
aaattagggaggcctgaatttgatatagcacggaatgtcttagatttgatatatgcccag
acactggcatggattggaatgtttttctctcccctcctgccaataatccagattattaaa
ctcttcatcattttttatgttaaaaaggtgagtctgatgatgaactgtaccccacctcgc
agagcctggcgagcagctcaaatgacaacaattttcatatttctcctatttttcccatca
tttgctggcgttctttgtatgattggtgtcactgtctggagacgacagccatcacaaaac
tgtggtccttttcgaggcttggaaactccttatcaatctatatccaactgggtgtcctcc
ttgactatatttgataactcactgtgggttgtttggatttatgaaaatatagtcgagagc
gttcttttcttctacattctgactctgattgtgctaataatttcctatttgtactggcaa
ataattcaaggtcgaaagattatggtgaagcatttgtaccagcaaattgccaatgaagga
aaagataaatcatttttacttcatgaacttcggaaagcccagagcctaaatgaagctcca
ggcaggcccccatacaaagcagcacaaagacagatgcagtcttcatacagaagtcaggaa
atgcacactgtaaatgaacacattccacttgagcccaggagtgaaagcattgggacttca
gatgtcctggggcttgcaatgagggcgcgacaacaggctgagatggaggaaagctcatcg
gcactgaatagtagactctcaagcaataatgattaccctccagattcaacaggactagct
tggagttcaagaaaacagcaggactcaggcagggagccattctggaacaatgatagccgg
tcagaggcaatagccatggttatgagagaaagacaattggctgaaagaggaccacctact
ggttaa
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