KEGG   Xenopus laevis (African clawed frog): 108703120
Entry
108703120         CDS       T01010                                 
Symbol
tmc5.S
Name
(RefSeq) transmembrane channel-like protein 5
  KO
K21988  transmembrane channel-like protein
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:xla02000]
    108703120 (tmc5.S)
   03037 Cilium and associated proteins [BR:xla03037]
    108703120 (tmc5.S)
Transporters [BR:xla02000]
 Other transporters
  Pores ion channels [TC:1]
   108703120 (tmc5.S)
Cilium and associated proteins [BR:xla03037]
 Other cilia and associated proteins
  Stereociliary proteins
   108703120 (tmc5.S)
SSDB
Motif
Pfam: TMC
Other DBs
NCBI-GeneID: 108703120
NCBI-ProteinID: XP_018094608
Xenbase: XB-GENE-17345679
UniProt: A0A1L8EQB1 A0A974H1Z5
LinkDB
Position
9_10S:complement(90150136..90199310)
AA seq 901 aa
MSRKNSDGFINAAYHDSETLQMDRGLFSTSFSRQKSSFYNPNPYNDDDIGYGEQPPEMRH
NKLFLPMNSVQQDPEYSQQIPRNVVPKNNPYGEGEHSNPAFEPDSNTVTSYNYNGTEGHP
YFGSGIDLAEDPSFRRRSSRKSTTVLQPRISDVDPSLEQQENEELVRKLADLPTADIAKE
LRKIPTSLKAKRDLRSKVFLLKQKSFKGAYQMDCCNGCLHHIRVLSRKSRQSIADILVSL
QLWHSTLKVIGSKFGTSILSYFIFLKWLLRFNIFSFIVNFSFITIPQFFDMNPNNLSFSG
LELLTGAGYFQDTVLYYGFYTNSTIRNNESLAPYNMQLAYIFTIGLYLAACFLILLFSMA
RSFRKNFINPASFSGNACKLLCSWDFSITHEKVVNLKRRNLSTQIKETLSEILQEKLKLT
VSQRIVRFLIHLAAWLVSSGIAAGCCAGVYYLCLNLQSLQNASANELTRQAATLLVPVVV
ALINMIIPLVYAMFFLVEKYKYPKHEIYVEIIRNVLLKISIIGILCYYWLHSVAESQSEC
WESFVGEDIYRLVVIDFIFALIGSFFGEFIRRIIGMHCCKKLGRPEFDIARNVLDLIYAQ
TLAWIGMFFSPLLPIIQIIKLFIIFYVKKVSLMMNCTPPRRAWRAAQMTTIFIFLLFFPS
FAGVLCMIGVTVWRRQPSQNCGPFRGLETPYQSISNWVSSLTIFDNSLWVVWIYENIVES
VLFFYILTLIVLIISYLYWQIIQGRKIMVKHLYQQIANEGKDKSFLLHELRKAQSLNEAP
GRPPYKAAQRQMQSSYRSQEMHTVNEHIPLEPRSESIGTSDVLGLAMRARQQAEMEESSS
ALNSRLSSNNDYPPDSTGLAWSSRKQQDSGREPFWNNDSRSEAIAMVMRERQLAERGPPT
G
NT seq 2706 nt   +upstreamnt  +downstreamnt
atgtctcgcaaaaacagtgatggttttattaatgcagcctatcatgactcagaaaccttg
caaatggacagagggctgtttagcacatcgttctcaagacagaagtcatcgttctacaac
cctaatccctacaatgatgatgacattggctatggggaacaaccacctgaaatgaggcat
aacaaattgtttttgccaatgaactcagtgcaacaagatcctgaatacagccagcaaatt
ccaagaaacgttgttccaaaaaacaatccctatggagaaggagaacatagtaatcctgcc
tttgaaccagattccaatacagttacatcctataattataatggtactgaaggacaccca
tactttggcagtgggattgacctagcagaagatccaagtttcagaagacggtccagtaga
aagagcacaactgtgcttcagccaaggatttcggatgttgatccctctcttgaacaacaa
gaaaatgaagagcttgttaggaagcttgcagacttgccgactgccgacatagccaaagaa
ctcagaaagattccaacctctttgaaagcaaaacgtgacctgaggagcaaagtcttcttg
ttgaaacagaagtcatttaaaggtgcctaccaaatggactgttgtaatggatgtcttcac
catataagagtgttgtcccggaaatccaggcagtcaatagcagatattttggtatcattg
caactttggcacagcacactcaaagtaatagggagcaagtttggaacaagtatcctctcc
tattttatattcctcaagtggctcctgaggtttaacatcttctcatttattgtgaacttc
agtttcataacaattccacagttctttgatatgaaccccaacaacttgtcattttctggc
ctggagctactaacaggagctggctattttcaggacactgttttgtactatggtttttac
accaattctacaatcagaaacaatgagagcctcgctccttacaacatgcagctcgcctat
atcttcactatcggactgtaccttgcagcctgcttccttatcttgctatttagcatggca
agatcattccgtaagaatttcattaatccagcctccttctcaggcaatgcctgtaagctt
ctctgcagttgggatttcagcataactcatgaaaaggttgtgaatctaaagagaaggaat
ctgagtacacaaataaaggaaactctttcagaaatattacaggagaaactgaagttaact
gtgagtcagaggattgtacgttttctaatccatttggcagcatggttggtctccagtggc
attgcagctggatgctgtgctggtgtatactatctctgcttgaaccttcaatcccttcag
aatgcaagtgctaatgaactgacaaggcaagcagcaacattactggttccagtggtagtt
gccctgatcaatatgatcattcctcttgtctacgccatgtttttccttgtagagaaatac
aagtacccaaagcatgaaatctacgtagagattataaggaatgttctcctgaagatttcc
atcattggcattctgtgttattactggttacattccgttgctgaatcccagtctgagtgc
tgggaatcatttgtgggagaagacatctatcggcttgtagtgatcgatttcatatttgcc
ctgattggttccttctttggagaatttataagaagaatcattgggatgcactgctgcaaa
aaattagggaggcctgaatttgatatagcacggaatgtcttagatttgatatatgcccag
acactggcatggattggaatgtttttctctcccctcctgccaataatccagattattaaa
ctcttcatcattttttatgttaaaaaggtgagtctgatgatgaactgtaccccacctcgc
agagcctggcgagcagctcaaatgacaacaattttcatatttctcctatttttcccatca
tttgctggcgttctttgtatgattggtgtcactgtctggagacgacagccatcacaaaac
tgtggtccttttcgaggcttggaaactccttatcaatctatatccaactgggtgtcctcc
ttgactatatttgataactcactgtgggttgtttggatttatgaaaatatagtcgagagc
gttcttttcttctacattctgactctgattgtgctaataatttcctatttgtactggcaa
ataattcaaggtcgaaagattatggtgaagcatttgtaccagcaaattgccaatgaagga
aaagataaatcatttttacttcatgaacttcggaaagcccagagcctaaatgaagctcca
ggcaggcccccatacaaagcagcacaaagacagatgcagtcttcatacagaagtcaggaa
atgcacactgtaaatgaacacattccacttgagcccaggagtgaaagcattgggacttca
gatgtcctggggcttgcaatgagggcgcgacaacaggctgagatggaggaaagctcatcg
gcactgaatagtagactctcaagcaataatgattaccctccagattcaacaggactagct
tggagttcaagaaaacagcaggactcaggcagggagccattctggaacaatgatagccgg
tcagaggcaatagccatggttatgagagaaagacaattggctgaaagaggaccacctact
ggttaa

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